RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 M0R135 149 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 CDC14BO60729 498 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 ANPEPP15144 967 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 EPHA1P21709 976 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 SLC6A9P48067 706 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 HILS1P60008 231 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 GRB2P62993 217 aaKnown RBP13.56□□□□□ -0.24
VAPA-204ENST00000577901 TMEM255AQ5JRV8 349 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 DRAM2Q6UX65 266 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 FBXW12Q6X9E4 464 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 C1orf229Q6ZS94 237 aaPredicted RBP13.56□□□□□ -0.24
VAPA-204ENST00000577901 USP43Q70EL4 1123 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 DPY19L4Q7Z388 723 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 NAA40Q86UY6 237 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 TIGD4Q8IY51 512 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 TEX29Q8N6K0 151 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 OR10S1Q8NGN2 331 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 ZNF799Q96GE5 643 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 ZNF582Q96NG8 517 aaPredicted RBP13.56□□□□□ -0.24
VAPA-204ENST00000577901 KCNJ15Q99712 375 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 CIB1Q99828 191 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 PKP2Q99959 881 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
VAPA-204ENST00000577901 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 MSL2Q9HCI7 577 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 G6PC2Q9NQR9 355 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 H2AFY2Q9P0M6 372 aaPredicted RBP13.56□□□□□ -0.24
VAPA-204ENST00000577901 LOC105371242A0A075B767 164 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 ZSCAN5BA6NJL1 495 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 ZAR1LA6NP61 321 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 H3BNX3 289 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 AVPP01185 164 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 ADH4P08319 380 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 PSKH1P11801 424 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 SELEP16581 610 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 TNFSF4P23510 183 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 CRYBB2P43320 205 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 MVKQ03426 396 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 HLXQ14774 488 aaPredicted RBP13.55□□□□□ -0.24
VAPA-204ENST00000577901 SLX4IPQ5VYV7 408 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 RHOUQ7L0Q8 258 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 GTF3AQ92664 365 aaKnown RBP13.55□□□□□ -0.24
VAPA-204ENST00000577901 ABHD6Q9BV23 337 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
VAPA-204ENST00000577901 IGHV1-69-2A0A0G2JMI3 117 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 PRKYO43930 277 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 APOC1P02654 83 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 CD55P08174 381 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 EGR1P18146 543 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 HSD11B1P28845 292 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 OTX1P32242 354 aaPredicted RBP13.54□□□□□ -0.24
VAPA-204ENST00000577901 PRKXP51817 358 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 TNFAIP6P98066 277 aaPredicted RBP13.54□□□□□ -0.24
VAPA-204ENST00000577901 CDK5R2Q13319 367 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 APOFQ13790 326 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 HFEQ30201 348 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 AVPI1Q5T686 147 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 LCN1P1Q5VSP4 162 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 OR2T2Q6IF00 324 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 USP51Q70EK9 711 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 SPATC1Q76KD6 591 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 TCEANCQ8N8B7 351 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 ELMOD3Q96FG2 381 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 JMJD8Q96S16 334 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 TEAD3Q99594 435 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 SP140LQ9H930 580 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 S100A14Q9HCY8 104 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 ORC6Q9Y5N6 252 aa13.54□□□□□ -0.24
VAPA-204ENST00000577901 A0A0G2JMP0 313 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 A0A0X1KG70 313 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 PLPP2O43688 288 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 SELENOFO60613 162 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 LYNP07948 512 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 SLC2A5P22732 501 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 EPHA2P29317 976 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 GK2Q14410 553 aaPredicted RBP13.53□□□□□ -0.24
VAPA-204ENST00000577901 C12orf73Q69YU5 71 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 MRPL21Q7Z2W9 205 aaKnown RBP13.53□□□□□ -0.24
VAPA-204ENST00000577901 C1QL2Q7Z5L3 287 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.53□□□□□ -0.24
VAPA-204ENST00000577901 OR5AS1Q8N127 324 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 ZNF283Q8N7M2 679 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 OR2Z1Q8NG97 314 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 OR4M2Q8NGB6 313 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 OR13G1Q8NGZ3 307 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 RNF133Q8WVZ7 376 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 RAB39BQ96DA2 213 aa13.53□□□□□ -0.24
VAPA-204ENST00000577901 TMPRSS13Q9BYE2 586 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms