RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CACFD1Q9UGQ2 172 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SLC17A4Q9Y2C5 497 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ARHGEF17Q96PE2 2063 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SPAG17Q6Q759 2223 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 GPANK1O95872 356 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 AMY2BP19961 511 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SEC13P55735 322 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SPCS3P61009 180 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF239Q16600 458 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RPUSD3Q6P087 351 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF550Q7Z398 422 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 OR10G6Q8NH81 332 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM74BQ9NUR3 256 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 PISDQ9UG56 409 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SDK1Q7Z5N4 2213 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 AHSA1O95433 338 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RPL12P30050 165 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ADPRHP54922 357 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 STARD6P59095 220 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RAB1AP62820 205 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 OR8G1Q15617 311 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 TEX30Q5JUR7 227 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 CCDC54Q8NEL0 328 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 OR2A1Q8NGT9 310 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 BCO1Q9HAY6 547 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF878C9JN71 531 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 C9JQL5 133 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 JTBO76095 146 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 SCAF4O95104 1147 aaKnown RBP8.59□□□□□ -1.03
CCDC40-212ENST00000574799 PPICP45877 212 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ARRB1P49407 418 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-212ENST00000574799 PRPS1P60891 318 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ACY1Q03154 408 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-212ENST00000574799 SLC25A24Q6NUK1 477 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 OR5H2Q8NGV7 314 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ADAMTS17Q8TE56 1095 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 PPP1R14AQ96A00 147 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 RAB7BQ96AH8 199 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ZDHHC8Q9ULC8 765 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 C14orf166Q9Y224 244 aaKnown RBP8.59□□□□□ -1.03
CCDC40-212ENST00000574799 KLHDC2Q9Y2U9 406 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 SOX15O60248 233 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 BATFQ16520 125 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 WDR38Q5JTN6 314 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 FNDC9Q8TBE3 224 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 LCN9Q8WX39 176 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 METTL21AQ8WXB1 218 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ST6GALNAC5Q9BVH7 336 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 WDR76Q9H967 626 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 PRDM7Q9NQW5 492 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-212ENST00000574799 CHRNA9Q9UGM1 479 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 SLCO1B1Q9Y6L6 691 aa8.59□□□□□ -1.03
CCDC40-212ENST00000574799 A0A1W2PPC1 479 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 MEGF11A6BM72 1044 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 OR4C45A6NMZ5 311 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 H0Y8X5 98 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 MPIG6BO95866 241 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 GNB3P16520 340 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 HOXA5P20719 270 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 RAB4BP61018 213 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 KCTD18Q6PI47 426 aaPredicted RBP8.59□□□□□ -1.04
CCDC40-212ENST00000574799 NPEPL1Q8NDH3 523 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 TERB2Q8NHR7 220 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 MISP3Q96FF7 219 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 C1orf198Q9H425 327 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 FBXL17Q9UF56 701 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 KLF15Q9UIH9 416 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 KLK13Q9UKR3 277 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 ENTPD2Q9Y5L3 495 aa8.59□□□□□ -1.04
CCDC40-212ENST00000574799 SCN2AQ99250 2005 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 OR5H15A6NDH6 313 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 OR5H1A6NKK0 313 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TAAR5O14804 337 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CST4P01036 141 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CPMP14384 443 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 CDKN2AP42771 156 aaKnown RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 GGNBP1Q5YKI7 109 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 KIRREL2Q6UWL6 708 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ZDHHC22Q8N966 263 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 SUSD6Q92537 303 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 THOC3Q96J01 351 aaKnown RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 DBX1A6NMT0 343 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ALDH3B1P43353 468 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 MOGAT2Q3SYC2 334 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM128Q5BJH2 165 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 SFTPA2Q8IWL1 248 aa8.58□□□□□ -1.04
CCDC40-212ENST00000574799 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms