RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZDHHC8Q9ULC8 765 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 PCDHGB1Q9Y5G3 927 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 STAB1Q9NY15 2570 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ACOD1A6NK06 481 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 C17orf100A8MU93 164 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 XRCC2O43543 280 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 NDUFS7O75251 213 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ENTPD6O75354 484 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 CLIC3O95833 236 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ANXA2P07355 339 aaKnown RBP9.42□□□□□ -0.9
CHD3-216ENST00000573936 GNAO1P09471 354 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 CFL1P23528 166 aaKnown RBP9.42□□□□□ -0.9
CHD3-216ENST00000573936 DCTDP32321 178 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 MTNR1AP48039 350 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 PDLIM4P50479 330 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 RIDAP52758 137 aaKnown RBP9.42□□□□□ -0.9
CHD3-216ENST00000573936 HCCSP53701 268 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ROM1Q03395 351 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 EGR3Q06889 387 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 IL18R1Q13478 541 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ALKBH6Q3KRA9 238 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 USP51Q70EK9 711 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 MRPL21Q7Z2W9 205 aaKnown RBP9.42□□□□□ -0.9
CHD3-216ENST00000573936 ENTHD1Q8IYW4 607 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 ZNF679Q8IYX0 411 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 SETD9Q8NE22 299 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 OR52H1Q8NGJ2 320 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 Q96MF0 132 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 TPK1Q9H3S4 243 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 POFUT1Q9H488 388 aa9.42□□□□□ -0.9
CHD3-216ENST00000573936 SONP18583 2426 aaKnown RBP9.42□□□□□ -0.9
CHD3-216ENST00000573936 RTTNQ86VV8 2226 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 MXRA5Q9NR99 2828 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 H7C1Q1 480 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 NDUFS8O00217 210 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 TBX1O43435 398 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ADH4P08319 380 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 NAT2P11245 290 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 GABRB1P18505 474 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 TNFSF4P23510 183 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 MMP15P51511 669 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ZNF121P58317 390 aaPredicted RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 CXCR4P61073 352 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 MRPS11P82912 194 aaKnown RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 IL5RAQ01344 420 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ZNF829Q3KNS6 432 aaPredicted RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 ZNF691Q5VV52 312 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 LRRN1Q6UXK5 716 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ZCCHC24Q8N2G6 241 aaKnown RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 OR8G5Q8NG78 346 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 FAM168AQ92567 244 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ITFG2Q969R8 447 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 RNFT2Q96EX2 444 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 MRPL48Q96GC5 212 aaKnown RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 PGAM5Q96HS1 289 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 COX4I2Q96KJ9 171 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 AMELYQ99218 206 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 ZNF391Q9UJN7 358 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 IKZF2Q9UKS7 526 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 RAB26Q9ULW5 256 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 COPS3Q9UNS2 423 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 NOP16Q9Y3C1 178 aaKnown RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 RPL36Q9Y3U8 105 aaKnown RBP9.41□□□□□ -0.9
CHD3-216ENST00000573936 LRP12Q9Y561 859 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 N6AMT1Q9Y5N5 214 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 HSPE1-MOB4S4R3N1 261 aa9.41□□□□□ -0.9
CHD3-216ENST00000573936 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 GGT3PA6NGU5 568 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 IQCF6A8MYZ5 107 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 TPD52L2O43399 206 aaKnown RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 SPRY3O43610 288 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 SLC2A1P11166 492 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 DAOP14920 347 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 DDOSTP39656 456 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 PSMA6P60900 246 aaKnown RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 ACTC1P68032 377 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 ACTA1P68133 377 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 CDK5R2Q13319 367 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 GK2Q14410 553 aaPredicted RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 HLXQ14774 488 aaPredicted RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 TIGD6Q17RP2 521 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 SNAI3Q3KNW1 292 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 GLYATL3Q5SZD4 288 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 OR2T2Q6IF00 324 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 ZNF322Q6U7Q0 402 aaPredicted RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 FAM57BQ71RH2 274 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 CIARTQ8N365 385 aaPredicted RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 ZNF786Q8N393 782 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 ZNF540Q8NDQ6 660 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 OR10H4Q8NGA5 316 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 OR13G1Q8NGZ3 307 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 RDH5Q92781 318 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms