RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SNAI3Q3KNW1 292 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 DRAM2Q6UX65 266 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 BTNL3Q6UXE8 466 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 COLCA1Q6ZS62 124 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 KLBQ86Z14 1044 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 BOLLQ8N9W6 283 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 DEFB108BQ8NET1 73 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 OR10G2Q8NGC3 310 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 OR8B3Q8NGG8 313 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 OR10S1Q8NGN2 331 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 DVL3Q92997 716 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 SLAMF6Q96DU3 332 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 NEIL1Q96FI4 390 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 OR8B2Q96RD0 313 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 MMADHCQ9H3L0 296 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 DDX28Q9NUL7 540 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 VNN3Q9NY84 501 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 MIOXQ9UGB7 285 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 OPN4Q9UHM6 478 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 PRPF19Q9UMS4 504 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 PPIAL4AQ9Y536 164 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
NPLOC4-212ENST00000573328 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 hCG_1807616A0A1W2PRN6 198 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 A6NLC8 198 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CD300LBA8K4G0 201 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 TRAPPC2LH3BP13 241 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 FAM20BO75063 409 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CST1P01037 141 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ANXA2P07355 339 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 RAP2AP10114 183 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CLUP10909 449 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF12P17014 697 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 SPI1P17947 270 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CD200P41217 278 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 PITPNBP48739 271 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 MS4A2Q01362 244 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF92Q03936 586 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 EIF2B1Q14232 305 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 TIGD6Q17RP2 521 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF181Q2M3W8 571 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 GFOD2Q3B7J2 385 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 KRTAP27-1Q3LI81 207 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF404Q494X3 552 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 GLYATL3Q5SZD4 288 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF770Q6IQ21 691 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ERI1Q8IV48 349 aaKnown RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 IQCF1Q8N6M8 205 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNF511Q8NB15 262 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 C19orf18Q8NEA5 215 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 OR6N2Q8NGY6 317 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 OR4Q3Q8NH05 313 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 GIPC3Q8TF64 312 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ZNRF4Q8WWF5 429 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 ASB9Q96DX5 294 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CLPTM1LQ96KA5 538 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 TECTBQ96PL2 329 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 NIPSNAP1Q9BPW8 284 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 TMEM246Q9BRR3 403 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 DGCR6LQ9BY27 220 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 SLC22A4Q9H015 551 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 FN3KRPQ9HA64 309 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 NTN4Q9HB63 628 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 TMEM165Q9HC07 324 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 DNAJC27Q9NZQ0 273 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 CLN8Q9UBY8 286 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 NUP50Q9UKX7 468 aa8.09□□□□□ -1.11
NPLOC4-212ENST00000573328 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 TRAV40A0A0B4J280 105 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 IGHV2-70DA0A0C4DH43 119 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 FAM183AA6NL82 134 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 XRCC2O43543 280 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 E2F6O75461 281 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 FSHBP01225 129 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 WNT2P09544 360 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 PSKH1P11801 424 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 PAICSP22234 425 aaKnown RBP8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 CFPP27918 469 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 POU1F1P28069 291 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 GATA4P43694 442 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 SLC15A1P46059 708 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 CX3CR1P49238 355 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 BLVRAP53004 296 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 SLC25A1P53007 311 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 MAB21L1Q13394 359 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 OR8B8Q15620 311 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 MPPED2Q15777 294 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 DCDC5Q6ZRR9 648 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 PARP8Q8N3A8 854 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 CELF2-AS1Q8N7Q2 184 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 C3orf56Q8N813 242 aa8.08□□□□□ -1.12
NPLOC4-212ENST00000573328 OR56B2PQ8NGI1 322 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms