RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ZNF829Q3KNS6 432 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-211ENST00000572174 MEDAGQ5VYS4 303 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 USP51Q70EK9 711 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 KLBQ86Z14 1044 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 BBS1Q8NFJ9 593 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 FAM81AQ8TBF8 368 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 RAB1CQ92928 201 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 MSL2Q9HCI7 577 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF275Q9NSD4 429 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-211ENST00000572174 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
RPAIN-211ENST00000572174 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPAIN-211ENST00000572174 MALRD1Q5VYJ5 2156 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 A0A096LNT2 108 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-211ENST00000572174 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 GGT3PA6NGU5 568 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 TBX1O43435 398 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 PPIHO43447 177 aaKnown RBP11.86□□□□□ -0.51
RPAIN-211ENST00000572174 LY6G6DO95868 133 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ALOX5APP20292 161 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 PCMT1P22061 227 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 EPHA2P29317 976 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 EFNB1P98172 346 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 DBPQ10586 325 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-211ENST00000572174 AADACL4Q5VUY2 407 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 CYB5R2Q6BCY4 276 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 CELF2-AS1Q8N7Q2 184 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 SPERTQ8NA61 448 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ERGIC1Q969X5 290 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 RAB39BQ96DA2 213 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 IL4I1Q96RQ9 567 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 SLC30A2Q9BRI3 323 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
RPAIN-211ENST00000572174 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF469Q96JG9 3925 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF670-ZNF695F2Z2N8 137 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 RP2O75695 350 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 PSKH1P11801 424 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 HTR1FP30939 366 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 RIDAP52758 137 aaKnown RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF121P58317 390 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 ROM1Q03395 351 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 C1orf87Q8N0U7 546 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 OR5AS1Q8N127 324 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 BHLHE23Q8NDY6 225 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 CSNK2A3Q8NEV1 391 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 PGAM5Q96HS1 289 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 Q96MT0 163 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 VCXQ9H320 206 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 MOB1AQ9H8S9 216 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 LRP12Q9Y561 859 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 GMPPBQ9Y5P6 360 aa11.85□□□□□ -0.51
RPAIN-211ENST00000572174 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-211ENST00000572174 LRRC30A6NM36 301 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ANKRD30BLA7E2S9 258 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 CD300LBA8K4G0 201 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 GMDSO60547 372 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 CDC14BO60729 498 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 MRPL3P09001 348 aaKnown RBP11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ANPEPP15144 967 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 SNRPGP62308 76 aaKnown RBP11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ACTC1P68032 377 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ACTA1P68133 377 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 EGR3Q06889 387 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 OR8G1Q15617 311 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 TMEM255AQ5JRV8 349 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 GLYATL3Q5SZD4 288 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 FAM166AQ6J272 317 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 SLC35F2Q8IXU6 374 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 PACRGLQ8N7B6 248 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 PLPP7Q8NBV4 271 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ZNF555Q8NEP9 628 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 CCL17Q92583 94 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
RPAIN-211ENST00000572174 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 REEP6Q96HR9 211 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 APOL4Q9BPW4 351 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 GSX1Q9H4S2 264 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-211ENST00000572174 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 SMPD3Q9NY59 655 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-211ENST00000572174 DNAJC27Q9NZQ0 273 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 IKZF2Q9UKS7 526 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 PPP1R3CQ9UQK1 317 aa11.84□□□□□ -0.51
RPAIN-211ENST00000572174 VPS13CQ709C8 3753 aa11.83□□□□□ -0.51
RPAIN-211ENST00000572174 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms