RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR2T6Q8NHC8 308 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ZNF563Q8TA94 476 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ZNF519Q8TB69 540 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 PNPT1Q8TCS8 783 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 GEMIN6Q8WXD5 167 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 C11orf40Q8WZ69 217 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 LZICQ8WZA0 190 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CDS1Q92903 461 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TAMM41Q96BW9 452 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 GIMAP5Q96F15 307 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 CNBD2Q96M20 576 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ZNF347Q96SE7 839 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 EPYCQ99645 322 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 BTBD2Q9BX70 525 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 MRPS26Q9BYN8 205 aaKnown RBP5.67□□□□□ -1.5
CHD3-213ENST00000571249 LINC00470Q9BZP3 86 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 MEGF9Q9H1U4 602 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 GPR35Q9HC97 309 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 BCL2L10Q9HD36 194 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 EXD2Q9NVH0 621 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 RCE1Q9Y256 329 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 ANGPT4Q9Y264 503 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 FAM96BQ9Y3D0 163 aa5.67□□□□□ -1.5
CHD3-213ENST00000571249 M0QX08 132 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 HMGN4O00479 90 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 GNGT2O14610 69 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 SLC43A1O75387 559 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 SNAP29O95721 258 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 RAB36O95755 333 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 ZNF682O95780 498 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 LY6G6CO95867 125 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 AMY1AP04745 511 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 GNAO1P09471 354 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
CHD3-213ENST00000571249 BTF3P20290 206 aaKnown RBP5.66□□□□□ -1.5
CHD3-213ENST00000571249 NOS3P29474 1203 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 CHI3L1P36222 383 aaPredicted RBP5.66□□□□□ -1.5
CHD3-213ENST00000571249 CRATP43155 626 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 GATA4P43694 442 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 ALDH3B2P48448 385 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 ANXA11P50995 505 aaKnown RBP5.66□□□□□ -1.5
CHD3-213ENST00000571249 RAD23AP54725 363 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 SKP2Q13309 424 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 GPR68Q15743 365 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 BAK1Q16611 211 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 ARHGAP11BQ3KRB8 267 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 LIN52Q52LA3 116 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 IFI44LQ53G44 452 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 TMEM225Q6GV28 225 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 FAHD1Q6P587 224 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 CREB3L2Q70SY1 520 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 GRINAQ7Z429 371 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 VTCN1Q7Z7D3 282 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 KLBQ86Z14 1044 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 PDZD9Q8IXQ8 264 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 CLEC4FQ8N1N0 589 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 TSPAN14Q8NG11 270 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 OR56A1Q8NGH5 318 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 OR4C15Q8NGM1 316 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 OR4C13Q8NGP0 309 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 NFKBIDQ8NI38 313 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 SLC38A5Q8WUX1 472 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 RASSF5Q8WWW0 418 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 LHX4Q969G2 390 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 MAL2Q969L2 176 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 SPSB4Q96A44 273 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 DDIT4LQ96D03 193 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 PRR25Q96S07 402 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 MBOAT4Q96T53 435 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 FAM118AQ9NWS6 357 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 VNN3Q9NY84 501 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 NDUFAF4Q9P032 175 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 BAG5Q9UL15 447 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 TMEM5Q9Y2B1 443 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 MYRFQ9Y2G1 1151 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 ENPP4Q9Y6X5 453 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 HSPE1-MOB4S4R3N1 261 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 V9GYQ6 96 aa5.66□□□□□ -1.5
CHD3-213ENST00000571249 A0A087WXM4 84 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 hCG_1807616A0A1W2PRN6 198 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 TMEM72A0PK05 275 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
CHD3-213ENST00000571249 ARRDC5A6NEK1 342 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ZSCAN5BA6NJL1 495 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 AQP7P3A6NL99 342 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 NPIPB9F8W1W9 429 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 TOX4O94842 621 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 MFN2O95140 757 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 LY86O95711 162 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 CCL2P13500 99 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ETS2P15036 469 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 CHATP28329 748 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 RYKP34925 604 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 SOAT1P35610 550 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 MDH2P40926 338 aaKnown RBP5.65□□□□□ -1.5
CHD3-213ENST00000571249 DAPP51397 102 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ARHGDIAP52565 204 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 ISL1P61371 349 aa5.65□□□□□ -1.5
CHD3-213ENST00000571249 GNA13Q14344 377 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms