RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 GLYATL3Q5SZD4 288 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 NXNL2Q5VZ03 156 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 BCDIN3DQ7Z5W3 292 aaKnown RBP9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 OR2AE1Q8NHA4 323 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 CLDND2Q8NHS1 167 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 TMEM163Q8TC26 289 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 CCL17Q92583 94 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 OR2V2Q96R30 315 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 YIPF3Q9GZM5 350 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 S100A14Q9HCY8 104 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 TMEM160Q9NX00 188 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 KLHDC2Q9Y2U9 406 aa9.37□□□□□ -0.91
SHCBP1-207ENST00000569702 TANC2Q9HCD6 1990 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 CD300LBA8K4G0 201 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 H0YL77 283 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 EI24O14681 340 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 CRLF1O75462 422 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 H2BFMP0C1H6 154 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 HSD11B1P28845 292 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 ALDH3A2P51648 485 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 HCCSP53701 268 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 CDH15P55291 814 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 ZNF121P58317 390 aaPredicted RBP9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 LMO4P61968 165 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 SLC3A1Q07837 685 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 LCN1P1Q5VSP4 162 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 MEPCEQ7L2J0 689 aaKnown RBP9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 MRPL21Q7Z2W9 205 aaKnown RBP9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 BHLHE23Q8NDY6 225 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 OR10AD1Q8NGE0 317 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 OR52H1Q8NGJ2 320 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 THEM6Q8WUY1 208 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 ITLN1Q8WWA0 313 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 SGK3Q96BR1 496 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 MEGF10Q96KG7 1140 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 IL4I1Q96RQ9 567 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 OPA3Q9H6K4 179 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 TMEM100Q9NV29 134 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 DCAF16Q9NXF7 216 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 HAO2Q9NYQ3 351 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 TREM2Q9NZC2 230 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 ZNF319Q9P2F9 582 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 LAMP5Q9UJQ1 280 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 WIPI2Q9Y4P8 454 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 DYSFO75923 2080 aa9.36□□□□□ -0.91
SHCBP1-207ENST00000569702 LOC100289279A0A1B0GTE1 492 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 SLC22A31A6NKX4 558 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 XRCC2O43543 280 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 LMX1BO60663 402 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 TGFAP01135 160 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 HLA-DPB1P04440 258 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 ANXA2P07355 339 aaKnown RBP9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 ROM1Q03395 351 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 MVKQ03426 396 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 KRTAP21-3Q3LHN1 58 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 AVPI1Q5T686 147 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 FAM166AQ6J272 317 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 DEGS2Q6QHC5 323 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 LRRN1Q6UXK5 716 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 GID4Q8IVV7 300 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 PQLC1Q8N2U9 271 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 CBR4Q8N4T8 237 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 OR8J1Q8NGP2 316 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 SPRYD4Q8WW59 207 aaPredicted RBP9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 RAB1CQ92928 201 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 TIMD4Q96H15 378 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 HRASLS5Q96KN8 279 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 SIGLEC11Q96RL6 698 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 CNN2Q99439 309 aaKnown RBP9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 SLC22A4Q9H015 551 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 RIBC2Q9H4K1 309 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 NARFLQ9H6Q4 476 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 NIPAL2Q9H841 368 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 SP140LQ9H930 580 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 GCM1Q9NP62 436 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 H2AFY2Q9P0M6 372 aaPredicted RBP9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 PPP1R3CQ9UQK1 317 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 TMEM14AQ9Y6G1 99 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 CUBNO60494 3623 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 MXRA5Q9NR99 2828 aa9.35□□□□□ -0.91
SHCBP1-207ENST00000569702 GGT3PA6NGU5 568 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 FAM157AC9JC47 383 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 F5H5P2 479 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 GMDSO60547 372 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 PTBP3O95758 552 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 MRPL3P09001 348 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 CA6P23280 308 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 DCTDP32321 178 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 RBMXP38159 391 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 DDOSTP39656 456 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 GATA4P43694 442 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 SRP9P49458 86 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 MMP16P51512 607 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms