RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CDNFQ49AH0 187 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 ELFN2Q5R3F8 820 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF626Q68DY1 528 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 ABHD12BQ7Z5M8 362 aaPredicted RBP7.79□□□□□ -1.16
LINC00558-201ENST00000569422 MISPQ8IVT2 679 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 FAM109AQ8N4B1 249 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 OR5D18Q8NGL1 313 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 HGDQ93099 445 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 MR1Q95460 341 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 SEH1LQ96EE3 360 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 ADAT3Q96EY9 351 aaPredicted RBP7.79□□□□□ -1.16
LINC00558-201ENST00000569422 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 RASL10BQ96S79 203 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 MRPL37Q9BZE1 423 aaKnown RBP7.79□□□□□ -1.16
LINC00558-201ENST00000569422 PCED1AQ9H1Q7 454 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 NPDC1Q9NQX5 325 aaPredicted RBP7.79□□□□□ -1.16
LINC00558-201ENST00000569422 PIPOXQ9P0Z9 390 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF175Q9Y473 711 aa7.79□□□□□ -1.16
LINC00558-201ENST00000569422 CACNA1EQ15878 2313 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CYB5AP00167 134 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 F10P00742 488 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CCL4P13236 92 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF43P17038 809 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CXCL2P19875 107 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CLN3Q13286 438 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 ALKAL2Q6UX46 152 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 OR2AJ1Q8NGZ0 328 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 C15orf40Q8WUR7 153 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 OIT3Q8WWZ8 545 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 NINJ1Q92982 152 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 PBOV1Q9GZY1 135 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 WIF1Q9Y5W5 379 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 PI4KAP42356 2102 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 TRAV20A0A0B4J274 112 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CCSO14618 274 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 FOSL2P15408 326 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 GNB3P16520 340 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 PRSS12P56730 875 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 ATXN7L3Q14CW9 347 aaPredicted RBP7.78□□□□□ -1.16
LINC00558-201ENST00000569422 PLPPR5Q32ZL2 321 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 LRRC18Q8N456 261 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 COQ8AQ8NI60 647 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 SLC25A28Q96A46 364 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 CCDC120Q96HB5 630 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 ARL6Q9H0F7 186 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 C1orf198Q9H425 327 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 B3GAT1Q9P2W7 334 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 UBQLN2Q9UHD9 624 aa7.78□□□□□ -1.16
LINC00558-201ENST00000569422 PTRH2Q9Y3E5 179 aaKnown RBP7.78□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF726A6NNF4 738 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF736B4DX44 427 aaPredicted RBP7.77□□□□□ -1.16
LINC00558-201ENST00000569422 SULT2B1O00204 365 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 IFNA7P01567 189 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 TTRP02766 147 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 NFYAP23511 347 aaPredicted RBP7.77□□□□□ -1.16
LINC00558-201ENST00000569422 SORDQ00796 357 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 MFSD13AQ14CX5 517 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM244Q5VVB8 128 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 AWAT2Q6E213 333 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 ADGRE4PQ86SQ3 457 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 NAA40Q86UY6 237 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 COMMD7Q86VX2 200 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 BPIFB2Q8N4F0 458 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 OR6M1Q8NGM8 313 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 OR10S1Q8NGN2 331 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 NUBPLQ8TB37 319 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 SEC22AQ96IW7 307 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 SELENOIQ9C0D9 397 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 BANF2Q9H503 90 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 TAS2R8Q9NYW2 309 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF224Q9NZL3 707 aa7.77□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF230Q9UIE0 474 aaPredicted RBP7.77□□□□□ -1.16
LINC00558-201ENST00000569422 GDF2Q9UK05 429 aaPredicted RBP7.77□□□□□ -1.16
LINC00558-201ENST00000569422 LY6G6EA0A0G2JKS1 128 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
LINC00558-201ENST00000569422 WDPCPO95876 746 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF250P15622 560 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF20P17024 532 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 LAP3P28838 519 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 SLC6A9P48067 706 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 CLDN17P56750 224 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 BEX5Q5H9J7 111 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 FAM76BQ5HYJ3 339 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 RAET1LQ5VY80 246 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 FAM57BQ71RH2 274 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ANGPTL5Q86XS5 388 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ZNF283Q8N7M2 679 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 CLEC1AQ8NC01 280 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 OR2AK2Q8NG84 335 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 OR1J2Q8NGS2 313 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 SAP25Q8TEE9 199 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 CASTOR1Q8WTX7 329 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 MARC2Q969Z3 335 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 GPER1Q99527 375 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 ALKBH4Q9NXW9 302 aa7.77□□□□□ -1.17
LINC00558-201ENST00000569422 GPN3Q9UHW5 284 aaPredicted RBP7.77□□□□□ -1.17
LINC00558-201ENST00000569422 B3GALT5Q9Y2C3 310 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms