RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CELF2-AS1Q8N7Q2 184 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 OR4M2Q8NGB6 313 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 SPRYD4Q8WW59 207 aaPredicted RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 DNAJC9Q8WXX5 260 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 UTP4Q969X6 686 aaKnown RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 OTULINQ96BN8 352 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 TOR3AQ9H497 397 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 PCDHB10Q9UN67 800 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 MXRA5Q9NR99 2828 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 DNHD1Q96M86 4753 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 C5orf63A6NC05 138 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 CD300LBA8K4G0 201 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 PRR23D1E9PI22 279 aaPredicted RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 J3QLI3 93 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 PRR23D2P0DMB1 279 aaPredicted RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 GATA3P23771 443 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 MDH2P40926 338 aaKnown RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 GATA4P43694 442 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 PRKXP51817 358 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 GLYATL3Q5SZD4 288 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 PLBD1Q6P4A8 553 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 ZNF771Q7L3S4 317 aaPredicted RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 SHFQ7M4L6 423 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 RFLNBQ8N5W9 214 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 TEX29Q8N6K0 151 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 OR6N2Q8NGY6 317 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 OR2AE1Q8NHA4 323 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 ZNF420Q8TAQ5 688 aaPredicted RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 RNF133Q8WVZ7 376 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 ABHD6Q9BV23 337 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 SLC22A4Q9H015 551 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 OR51V1Q9H2C8 321 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 PATZ1Q9HBE1 687 aaKnown RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 SLC25A19Q9HC21 320 aa17.07■□□□□ 0.32
CLK3-225ENST00000569063 NOP16Q9Y3C1 178 aaKnown RBP17.07■□□□□ 0.32
CLK3-225ENST00000569063 PPIAL4EA0A075B759 164 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 PPIAL4CA0A0B4J2A2 164 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 PPIAL4DF5H284 164 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 PRODHO43272 600 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 TIPRLO75663 272 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 FSTL3O95633 263 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 PPIAL4FP0DN26 164 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 CD200P41217 278 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 MAB21L1Q13394 359 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 FAHD1Q6P587 224 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 C1orf229Q6ZS94 237 aaPredicted RBP17.06■□□□□ 0.32
CLK3-225ENST00000569063 SPATC1Q76KD6 591 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 MOGAT3Q86VF5 341 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 PHC2Q8IXK0 858 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 MUC20Q8N307 709 aaPredicted RBP17.06■□□□□ 0.32
CLK3-225ENST00000569063 ERGIC1Q969X5 290 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 SPSB4Q96A44 273 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 TEX12Q9BXU0 123 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 TMPRSS13Q9BYE2 586 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 OPA3Q9H6K4 179 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 METRNQ9UJH8 293 aa17.06■□□□□ 0.32
CLK3-225ENST00000569063 F5H0A9 414 aaPredicted RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 XRCC2O43543 280 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 GMDSO60547 372 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 FOXH1O75593 365 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 AVPP01185 164 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 SLC2A1P11166 492 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 CPT2P23786 658 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 ZFP36P26651 326 aaKnown RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 PMELP40967 661 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 CX3CR1P49238 355 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 LCN2P80188 198 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 DCAF12L2Q5VW00 463 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 CPOQ8IVL8 374 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 Q8TCH9 128 aa17.05■□□□□ 0.32
CLK3-225ENST00000569063 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 METTL17Q9H7H0 456 aaPredicted RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 PAPOLBQ9NRJ5 636 aaKnown RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 MRPL15Q9P015 296 aaKnown RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 POLR3KQ9Y2Y1 108 aaPredicted RBP17.05■□□□□ 0.32
CLK3-225ENST00000569063 IGHV3-64DA0A0J9YX35 117 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 GGT3PA6NGU5 568 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 LRRC30A6NM36 301 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 CYB5R3P00387 301 aaPredicted RBP17.04■□□□□ 0.32
CLK3-225ENST00000569063 APOC1P02654 83 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 CA6P23280 308 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 HSD11B1P28845 292 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 OPRL1P41146 370 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 DAPP51397 102 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 CRISP1P54107 249 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 RAD23AP54725 363 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 OR8G1Q15617 311 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 ATP6AP1Q15904 470 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 KRTAP24-1Q3LI83 254 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 SLC35D3Q5M8T2 416 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 TMEM236Q5W0B7 351 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 PRSS45Q7RTY3 260 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 C1orf87Q8N0U7 546 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 ZNF454Q8N9F8 522 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 OR5K1Q8NHB7 308 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 OTOSQ8NHW6 89 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 PLEKHA8Q96JA3 519 aa17.04■□□□□ 0.32
CLK3-225ENST00000569063 AMELYQ99218 206 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms