RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	SDC1	P18827	310 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TBXA2R	P21731	343 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PBLD	P30039	288 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	IFNGR2	P38484	337 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	FEN1	P39748	380 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PTGER3	P43115	390 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GRK6	P43250	576 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	MTNR1A	P48039	350 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TTPA	P49638	278 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SGSH	P51688	502 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SMS	P52788	366 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	DVL1P1	P54792	670 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	RPS20	P60866	119 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	RPS25	P62851	125 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PITX1	P78337	314 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CYCS	P99999	105 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CDK5	Q00535	292 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SPIB	Q01892	262 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PPP1R8	Q12972	351 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SYT14P1	Q58G82	188 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PYY3	Q5JQD4	70 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	C9orf152	Q5JTZ5	239 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	UBE2NL	Q5JXB2	153 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	DCAF10	Q5QP82	559 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GLT8D1	Q68CQ7	371 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	OR10K2	Q6IF99	312 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SFXN4	Q6P4A7	337 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	C22orf39	Q6P5X5	142 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TRIM40	Q6P9F5	258 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PAPD4	Q6PIY7	484 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ENPP7	Q6UWV6	458 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ASB18	Q6ZVZ8	466 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC16A14	Q7RTX9	510 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC36A1	Q7Z2H8	476 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	RNF144B	Q7Z419	303 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PXK	Q7Z7A4	578 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	LDB1	Q86U70	411 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF546	Q86UE3	836 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	VRK2	Q86Y07	508 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	MARCH9	Q86YJ5	346 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CBLN2	Q8IUK8	224 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GPR137C	Q8N3F9	429 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ACBD7	Q8N6N7	88 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SAMD12	Q8N8I0	201 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF383	Q8NA42	475 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TEX45	Q8NA69	505 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	OR6N1	Q8NGY5	312 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	LYPD6B	Q8NI32	183 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	STT3B	Q8TCJ2	826 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	WFDC5	Q8TCV5	224 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ARRDC3	Q96B67	414 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CMBL	Q96DG6	245 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	IMP4	Q96G21	291 aa	Known RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	MED8	Q96G25	268 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SMIM8	Q96KF7	97 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	NIPSNAP1	Q9BPW8	284 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	FICD	Q9BVA6	458 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TLNRD1	Q9H1K6	362 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ARRDC1-AS1	Q9H2J1	176 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC32A1	Q9H598	525 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TPT1P8	Q9HAU6	139 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	HRASLS	Q9HDD0	168 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ACKR4	Q9NPB9	350 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	LRFN1	Q9P244	771 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GALP	Q9UBC7	116 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GIMAP2	Q9UG22	337 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PISD	Q9UG56	409 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CLEC2D	Q9UHP7	191 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC9A8	Q9Y2E8	581 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ETV7	Q9Y603	341 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	MYLK	Q15746	1914 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PTPRQ	Q9UMZ3	2332 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	IGSF10	Q6WRI0	2623 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	YLPM1	P49750	1951 aa	Known RBP	4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	RP1	P56715	2156 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	AHCTF1	Q8WYP5	2266 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947		A0A0A0MQY5	61 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	C1orf226	A1L170	272 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	LRIT2	A6NDA9	550 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	GABRR3	A8MPY1	467 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947		C9JVG2	144 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947		H0YIV9	168 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	OR7A17	O14581	309 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	TAAR5	O14804	337 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	SURF4	O15260	269 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	MAGEB4	O15481	346 aa	Predicted RBP	4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	LANCL1	O43813	399 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	PRAMEF11	O60813	436 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	MED6	O75586	246 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	TOX	O94900	526 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	AKR7A3	O95154	331 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	CLDN7	O95471	211 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	SIX6	O95475	246 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	MOCS2	O96007	188 aa	Predicted RBP	4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	CD74	P04233	296 aa		4.27	□□□□□ -1.73
CBFB-208	ENST00000567947	EIF4E	P06730	217 aa	Known RBP	4.27	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms