RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CD200P41217 278 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 GATA4P43694 442 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 PRKXP51817 358 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 MNAT1P51948 309 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 PAX8Q06710 450 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 ZNF404Q494X3 552 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 TEX30Q5JUR7 227 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 RPL13AP3Q6NVV1 102 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 ZNF841Q6ZN19 808 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 USP43Q70EL4 1123 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 PRSS45Q7RTY3 260 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 LINC00471Q8N535 108 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 CCDC197Q8NCU1 140 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 OR52L1Q8NGH7 329 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 CCDC124Q96CT7 223 aaKnown RBP12.29□□□□□ -0.44
USB1-210ENST00000565151 FAM53CQ9NYF3 392 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 ZNF319Q9P2F9 582 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
USB1-210ENST00000565151 TRRAPQ9Y4A5 3859 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 ZNF593O00488 134 aaPredicted RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 TNFRSF13BO14836 293 aaPredicted RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 SRP9P49458 86 aaKnown RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 ENTPD1P49961 510 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 TPTEP56180 551 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 CD300LDQ6UXZ3 194 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 PGAP1Q75T13 922 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 SPATC1Q76KD6 591 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 KLBQ86Z14 1044 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 OR10G2Q8NGC3 310 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 ZFAND2BQ8WV99 257 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 CANT1Q8WVQ1 401 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 SLAMF6Q96DU3 332 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 ASB9Q96DX5 294 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 THTPAQ9BU02 230 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 MUC13Q9H3R2 512 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 REEP1Q9H902 201 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 UFSP2Q9NUQ7 469 aa12.28□□□□□ -0.44
USB1-210ENST00000565151 PRPF19Q9UMS4 504 aaKnown RBP12.28□□□□□ -0.44
USB1-210ENST00000565151 DHRS12A0PJE2 317 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 C3orf80F5H4A9 247 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 IGHV4-38-2P0DP08 117 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 RAP2AP10114 183 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 CFPP27918 469 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 FAM98BQ52LJ0 330 aaKnown RBP12.27□□□□□ -0.45
USB1-210ENST00000565151 KLHL12Q53G59 568 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 SIGLECL1Q8N7X8 197 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 OR2T33Q8NG76 320 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 Q8TCH9 128 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 FAM216AQ8WUB2 273 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 KCNJ15Q99712 375 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 C1orf21Q9H246 121 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 CMC2Q9NRP2 79 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 CENPMQ9NSP4 180 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 CTSZQ9UBR2 303 aa12.27□□□□□ -0.45
USB1-210ENST00000565151 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 TMEM89A2RUT3 159 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 FSTL3O95633 263 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 FMO3P31513 532 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 PSMB10P40306 273 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 ELF3P78545 371 aaPredicted RBP12.26□□□□□ -0.45
USB1-210ENST00000565151 MALLQ13021 153 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 ZNF826PQ6ZT77 177 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
USB1-210ENST00000565151 WDR86Q86TI4 376 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 C11orf53Q8IXP5 236 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 TIGD4Q8IY51 512 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 CELF2-AS1Q8N7Q2 184 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 OR6K6Q8NGW6 343 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 GIPC3Q8TF64 312 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 TAF15Q92804 592 aaKnown RBP eCLIP12.26□□□□□ -0.45
USB1-210ENST00000565151 POP5Q969H6 163 aaKnown RBP12.26□□□□□ -0.45
USB1-210ENST00000565151 SPTSSAQ969W0 71 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 SPSB4Q96A44 273 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 SGK3Q96BR1 496 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 SLC7A6OSQ96CW6 309 aaPredicted RBP12.26□□□□□ -0.45
USB1-210ENST00000565151 DUX5Q96PT3 197 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
USB1-210ENST00000565151 MARCH7Q9H992 704 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 BAIAP2Q9UQB8 552 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 LRCH1Q9Y2L9 728 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 KLHDC2Q9Y2U9 406 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 AUP1Q9Y679 476 aa12.26□□□□□ -0.45
USB1-210ENST00000565151 IGHV2-70DA0A0C4DH43 119 aa12.25□□□□□ -0.45
USB1-210ENST00000565151 C22orf46C9J442 243 aa12.25□□□□□ -0.45
USB1-210ENST00000565151 CST1P01037 141 aa12.25□□□□□ -0.45
USB1-210ENST00000565151 RPS2P15880 293 aaKnown RBP12.25□□□□□ -0.45
USB1-210ENST00000565151 PRKACGP22612 351 aa12.25□□□□□ -0.45
USB1-210ENST00000565151 COMPP49747 757 aaPredicted RBP12.25□□□□□ -0.45
USB1-210ENST00000565151 UBA52P62987 128 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms