RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR5M1Q8NGP8 315 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 N4BP2L2Q92802 583 aaPredicted RBP1.9□□□□□ -2.11
PALB2-203ENST00000565038 COL21A1Q96P44 957 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 ZNF391Q9UJN7 358 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 RABL2BQ9UNT1 228 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 UBIAD1Q9Y5Z9 338 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 DNMT1P26358 1616 aaKnown RBP1.9□□□□□ -2.11
PALB2-203ENST00000565038 ATP7AQ04656 1500 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 DAPK1P53355 1430 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 MYOM3Q5VTT5 1437 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 RIMS2Q9UQ26 1411 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 C3P01024 1663 aa1.9□□□□□ -2.11
PALB2-203ENST00000565038 TIAM1Q13009 1591 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 VWDEQ8N2E2 1590 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 MED14O60244 1454 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 PZPP20742 1482 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 ERVK-7P63135 1459 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CCDC141Q6ZP82 1450 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 FYCO1Q9BQS8 1478 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 SMIM26A0A096LP01 95 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 A0A1B0GW55 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 OR5H1A6NKK0 313 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 C16orf90A8MZG2 172 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CLOCKO15516 846 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 EIF4E2O60573 245 aaKnown RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 OR2J3O76001 311 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 GLSO94925 669 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 CYB5R3P00387 301 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4L2P0CJ85 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4L3P0CJ86 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4L5P0CJ88 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4L6P0CJ89 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4L7P0CJ90 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 PRLHRP49683 370 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 EIF3EP60228 445 aaKnown RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 FLI1Q01543 452 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 SP4Q02446 784 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CYP24A1Q07973 514 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DGCR6Q14129 220 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 MRPL23Q16540 153 aaKnown RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 TEX30Q5JUR7 227 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 GUSBP11Q6P575 273 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CDR2LQ86X02 465 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 GPR26Q8NDV2 337 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 NUBPLQ8TB37 319 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 APH1BQ8WW43 257 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 WDR34Q96EX3 536 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 LZTS2Q9BRK4 669 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CENPKQ9BS16 269 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 ANGPTL4Q9BY76 406 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 FRMD8P1Q9BZ68 369 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 TMEM27Q9HBJ8 222 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 COX16Q9P0S2 106 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 EXTL2Q9UBQ6 330 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DUX4Q9UBX2 424 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 PRDM15P57071 1507 aaPredicted RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 FAM135AQ9P2D6 1515 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 NOS1P29475 1434 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 FGD6Q6ZV73 1430 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 ANKRD50Q9ULJ7 1429 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 TET3O43151 1660 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 CLTCQ00610 1675 aaKnown RBP1.89□□□□□ -2.11
PALB2-203ENST00000565038 NEURL4Q96JN8 1562 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 UGGT1Q9NYU2 1555 aa1.89□□□□□ -2.11
PALB2-203ENST00000565038 DHX57Q6P158 1386 aaKnown RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 ABCC3O15438 1527 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 SYNJ2BP-COX16A0A087WUM0 186 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 IGHV3-72A0A0B4J1Y9 119 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 A0A0J9YXV3 536 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 NCBP2LA6PVI3 153 aaKnown RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 K7EMT4 169 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 PLPP1O14494 284 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 EIF1BO60739 113 aaKnown RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 CLDN11O75508 207 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 IGHV3-11P01762 117 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 SERPINE2P07093 398 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 EIF1P41567 113 aaKnown RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 RPS11P62280 158 aaKnown RBP eCLIP1.88□□□□□ -2.11
PALB2-203ENST00000565038 CHRNA6Q15825 494 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 CEP55Q53EZ4 464 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 FAM222AQ5U5X8 452 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 C9orf135Q5VTT2 229 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 REEP3Q6NUK4 255 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 CASP12Q6UXS9 341 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 NPSR1Q6W5P4 371 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 NANOGNBQ7Z5D8 188 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 FAM228AQ86W67 206 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 FAM71AQ8IYT1 594 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 IQCKQ8N0W5 287 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 ZNF645Q8N7E2 425 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 C1orf64Q8NEQ6 169 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 OR5T1Q8NG75 326 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 SLC2A14Q8TDB8 520 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 ACMSDQ8TDX5 336 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 IP6K3Q96PC2 410 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 ZNF317Q96PQ6 595 aaPredicted RBP1.88□□□□□ -2.11
PALB2-203ENST00000565038 RHOXF2Q9BQY4 288 aa1.88□□□□□ -2.11
PALB2-203ENST00000565038 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms