RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 CDH15P55291 814 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 MVKQ03426 396 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 OTOSQ8NHW6 89 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 SPRYD4Q8WW59 207 aaPredicted RBP11.35□□□□□ -0.59
CLK3-216ENST00000564468 TMEM158Q8WZ71 300 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 RAB3IPQ96QF0 476 aaPredicted RBP11.35□□□□□ -0.59
CLK3-216ENST00000564468 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 RBM4BQ9BQ04 359 aaKnown RBP11.35□□□□□ -0.59
CLK3-216ENST00000564468 BEX2Q9BXY8 128 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 SHARPINQ9H0F6 387 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 SEMA6AQ9H2E6 1030 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 NIPAL2Q9H841 368 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 PPP1R3CQ9UQK1 317 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 WIPI2Q9Y4P8 454 aa11.35□□□□□ -0.59
CLK3-216ENST00000564468 GGT3PA6NGU5 568 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 PSKH1P11801 424 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 CFL1P23528 166 aaKnown RBP11.34□□□□□ -0.59
CLK3-216ENST00000564468 DDOSTP39656 456 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 CX3CR1P49238 355 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 APOFQ13790 326 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 KPNB1Q14974 876 aaKnown RBP11.34□□□□□ -0.59
CLK3-216ENST00000564468 SLX4IPQ5VYV7 408 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 BHLHE23Q8NDY6 225 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 OR52H1Q8NGJ2 320 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 THEM6Q8WUY1 208 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 ITLN1Q8WWA0 313 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 PYDC1Q8WXC3 89 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 TEAD3Q99594 435 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 NARFLQ9H6Q4 476 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 TMEM106BQ9NUM4 274 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 LAMP5Q9UJQ1 280 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 OAZ3Q9UMX2 235 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 ORC6Q9Y5N6 252 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
CLK3-216ENST00000564468 CD300LBA8K4G0 201 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 SELENOFO60613 162 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 MITFO75030 526 aaPredicted RBP11.33□□□□□ -0.6
CLK3-216ENST00000564468 ANXA2P07355 339 aaKnown RBP11.33□□□□□ -0.6
CLK3-216ENST00000564468 SLC2A5P22732 501 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 IL2RGP31785 369 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
CLK3-216ENST00000564468 ZNF92Q03936 586 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 SNCBQ16143 134 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
CLK3-216ENST00000564468 SPATC1Q76KD6 591 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 SLC16A9Q7RTY1 509 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 GLCCI1Q86VQ1 547 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 KLBQ86Z14 1044 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 CELF2-AS1Q8N7Q2 184 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 ERGIC1Q969X5 290 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 MEGF10Q96KG7 1140 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 CIB1Q99828 191 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 GAL3ST1Q99999 423 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 OR10A2Q9H208 303 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 TREM2Q9NZC2 230 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 N6AMT1Q9Y5N5 214 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 NPTNQ9Y639 398 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 CACNG2Q9Y698 323 aa11.33□□□□□ -0.6
CLK3-216ENST00000564468 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 ISPDA4D126 451 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 SLC22A31A6NKX4 558 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 LRRC30A6NM36 301 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 TBX1O43435 398 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 PRKYO43930 277 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 GMDSO60547 372 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 ALOX5APP20292 161 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 OPRL1P41146 370 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 NAA10P41227 235 aaPredicted RBP11.32□□□□□ -0.6
CLK3-216ENST00000564468 LMO4P61968 165 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 GLYATL3Q5SZD4 288 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 NXNL2Q5VZ03 156 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 C12orf73Q69YU5 71 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 DEGS2Q6QHC5 323 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
CLK3-216ENST00000564468 KRT77Q7Z794 578 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 GID4Q8IVV7 300 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 TCEANCQ8N8B7 351 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 BBS1Q8NFJ9 593 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 OR10AD1Q8NGE0 317 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 OR51F2Q8NH61 342 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 TMEM163Q8TC26 289 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 SPSB4Q96A44 273 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 PGAM5Q96HS1 289 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 MNTQ99583 582 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 RGCCQ9H4X1 137 aa11.32□□□□□ -0.6
CLK3-216ENST00000564468 MRPL15Q9P015 296 aaKnown RBP11.32□□□□□ -0.6
CLK3-216ENST00000564468 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
CLK3-216ENST00000564468 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
CLK3-216ENST00000564468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
CLK3-216ENST00000564468 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms