RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 BPIFB3P59826 476 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 GNGT1P63211 74 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 MAB21L1Q13394 359 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 OR8G1Q15617 311 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 ZNF362Q5T0B9 420 aaPredicted RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 NAA40Q86UY6 237 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 SIGLECL1Q8N7X8 197 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 C22orf15Q8WYQ4 148 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 DACT3Q96B18 629 aaPredicted RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 UPRTQ96BW1 309 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 DGCR6LQ9BY27 220 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 MS4A7Q9GZW8 240 aaPredicted RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 FN3KQ9H479 309 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 MRPL15Q9P015 296 aaKnown RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 CLN8Q9UBY8 286 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 ZNF69Q9UC07 566 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 NDUFA2O43678 99 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 GASTP01350 101 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 IFNGP01579 166 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 HLA-DPB1P04440 258 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 HKR1P10072 659 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 PYCR1P32322 319 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 DDOSTP39656 456 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 PMELP40967 661 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 SLC15A1P46059 708 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 ENTPD1P49961 510 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
SPG7-210ENST00000564409 LCN8Q6JVE9 175 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 CYP2R1Q6VVX0 501 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 DHFR2Q86XF0 187 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 OR2T33Q8NG76 320 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 OR9Q2Q8NGE9 314 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 OR10S1Q8NGN2 331 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 SLC25A28Q96A46 364 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 TSSK6Q9BXA6 273 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 REEP1Q9H902 201 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 SP140LQ9H930 580 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 RNF7Q9UBF6 113 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 COMMD3-BMI1R4GMX3 469 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 TENM1Q9UKZ4 2725 aa12.54□□□□□ -0.4
SPG7-210ENST00000564409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
SPG7-210ENST00000564409 GGT3PA6NGU5 568 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 B2RBV5 119 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 XRCC2O43543 280 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 FAM20BO75063 409 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 APOC1P02654 83 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 LIPFP07098 398 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
SPG7-210ENST00000564409 CA6P23280 308 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 PSMB10P40306 273 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
SPG7-210ENST00000564409 HNRNPA0Q13151 305 aaKnown RBP12.53□□□□□ -0.4
SPG7-210ENST00000564409 TRIM25Q14258 630 aaKnown RBP12.53□□□□□ -0.4
SPG7-210ENST00000564409 TAF13Q15543 124 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 MICAQ29983 383 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 CD276Q5ZPR3 534 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 OR2T5Q6IEZ7 315 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 CD300LDQ6UXZ3 194 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 DCXRQ7Z4W1 244 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 PARP8Q8N3A8 854 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 AQP11Q8NBQ7 271 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 OR2T29Q8NH02 315 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 COPS4Q9BT78 406 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 C14orf119Q9NWQ9 140 aa12.53□□□□□ -0.4
SPG7-210ENST00000564409 TCRBV5S2A0A599 114 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 DNAJC9-AS1A6NH13 148 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 ZNF878C9JN71 531 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 ZNF593O00488 134 aaPredicted RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 ENSAO43768 121 aaKnown RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 ZNF205O95201 554 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 PLATP00750 562 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 ZNF3P17036 446 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 ATP6V1B2P21281 511 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 ZNF92Q03936 586 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 BAMBIQ13145 260 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 SNAI3Q3KNW1 292 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 OR8D4Q8NGM9 314 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 SPSB4Q96A44 273 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 NSL1Q96IY1 281 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 NUDT16L1Q9BRJ7 211 aaKnown RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 ADAT1Q9BUB4 502 aaKnown RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 KIF17Q9P2E2 1029 aa12.52□□□□□ -0.41
SPG7-210ENST00000564409 SAMHD1Q9Y3Z3 626 aaKnown RBP12.52□□□□□ -0.41
SPG7-210ENST00000564409 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
SPG7-210ENST00000564409 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms