RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 EXTL1Q92935 676 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 ITCHQ96J02 903 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 RNF145Q96MT1 663 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 FAIM2Q9BWQ8 316 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC17A9Q9BYT1 436 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 RBKSQ9H477 322 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 TMBIM4Q9HC24 238 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 MEPEQ9NQ76 525 aaPredicted RBP4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 HRASLS2Q9NWW9 162 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC25A37Q9NYZ2 338 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 NUDT4Q9NZJ9 180 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 OR51B4Q9Y5P0 310 aa4.36□□□□□ -1.71
VPS35P1-201ENST00000563400 OR5B21A6NL26 309 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 IDSB3KWA1 339 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FAM72CH0Y354 149 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 DENRO43583 198 aaKnown RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CEACAM4O75871 244 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 ACSM4P0C7M7 580 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CA6P23280 308 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CXCR2P25025 360 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 EDNRAP25101 427 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 ACVRL1P37023 503 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 SOX3P41225 446 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 AMTP48728 403 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 DNASE1L1P49184 302 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 TTPAP49638 278 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CLDN6P56747 220 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 ABCE1P61221 599 aaKnown RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 ERVS71-1P61550 626 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 RPS27AP62979 156 aaKnown RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC35B1P78383 322 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC10A7Q0GE19 358 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 OR5I1Q13606 314 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FAM72AQ5TYM5 149 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 WDR25Q64LD2 544 aaPredicted RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 DUPD1Q68J44 220 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FAM72DQ6L9T8 149 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 Q6YL49 198 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FAM72BQ86X60 149 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 GKN2Q86XP6 184 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 KIRREL3Q8IZU9 778 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC35F6Q8N357 371 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 TBC1D19Q8N5T2 526 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 PRELID2Q8N945 189 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 HGDQ93099 445 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FLYWCH2Q96CP2 140 aaKnown RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 IMP4Q96G21 291 aaKnown RBP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 FOPNLQ96NB1 174 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 IL17FQ96PD4 163 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 QKIQ96PU8 341 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 TBX15Q96SF7 602 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CIB1Q99828 191 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 CABLES2Q9BTV7 478 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 ING2Q9H160 280 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 GALPQ9UBC7 116 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 GREB1Q4ZG55 1949 aa4.35□□□□□ -1.71
VPS35P1-201ENST00000563400 TRAV8-7A0A075B6U6 113 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 A0A0A6YYD5 115 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 GLYATL1P3A0A0U1RQE8 302 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 A0A1B0GTI1 187 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 TSPAN11A1L157 253 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 NKX6-3A6NJ46 265 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 KCNK1O00180 336 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC1A7O00341 560 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ADAM10O14672 748 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 INPP4BO15327 924 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ATP6V0E1O15342 81 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 PRKYO43930 277 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 SNAP91O60641 907 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 CTSVO60911 334 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 CATP04040 527 aaKnown RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ZNF806P0C7X5 589 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 OCM2P0CE71 109 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ZNF883P0CG24 379 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 RPL35AP18077 110 aaKnown RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 GABRG2P18507 467 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 C4BPBP20851 252 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ZFP36L2P47974 494 aaKnown RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 PRKXP51817 358 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 DLX5P56178 289 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 TLE4Q04727 773 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 DPTQ07507 201 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ILF3Q12906 894 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 SF3A2Q15428 464 aaKnown RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 TAF1AQ15573 450 aaPredicted RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 TTLL9Q3SXZ7 439 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 SLC36A2Q495M3 483 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 OR2G6Q5TZ20 316 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 OTUD1Q5VV17 481 aaPredicted RBP4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 COX15Q7KZN9 410 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 GLT6D1Q7Z4J2 308 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 S100A7AQ86SG5 101 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 TMEM105Q8N8V8 129 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 OR4C3Q8NH37 302 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 ZNF502Q8TBZ5 544 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 OR5P2Q8WZ92 322 aa4.34□□□□□ -1.71
VPS35P1-201ENST00000563400 DYRK2Q92630 601 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms