RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 CR1P17927 2039 aa14.23□□□□□ -0.13
CLK3-207ENST00000562389 TANC2Q9HCD6 1990 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 SNTNA6NMZ2 147 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 PRR32B1ATL7 298 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 VWC2LB2RUY7 222 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 ZNF670-ZNF695F2Z2N8 137 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 ZNF254O75437 659 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 GIFP27352 417 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 DCTDP32321 178 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 CXCR4P61073 352 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 CCL8P80075 99 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 EGR3Q06889 387 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 TSTQ16762 297 aaKnown RBP14.22□□□□□ -0.13
CLK3-207ENST00000562389 ZNF322Q6U7Q0 402 aaPredicted RBP14.22□□□□□ -0.13
CLK3-207ENST00000562389 OR5AS1Q8N127 324 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 RFLNBQ8N5W9 214 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 OR52H1Q8NGJ2 320 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 OR2AE1Q8NHA4 323 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 RHOXF1Q8NHV9 184 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 REPIN1Q9BWE0 567 aaKnown RBP14.22□□□□□ -0.13
CLK3-207ENST00000562389 SAP30LQ9HAJ7 183 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 DECR2Q9NUI1 292 aa14.22□□□□□ -0.13
CLK3-207ENST00000562389 NKX1-2Q9UD57 310 aaPredicted RBP14.22□□□□□ -0.13
CLK3-207ENST00000562389 A0A096LNT2 108 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 RNF223E7ERA6 249 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 TBX1O43435 398 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 INHBBP09529 407 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 OR2T7P0C7T2 308 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 ACHEP22303 614 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 MTNR1AP48039 350 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 RIDAP52758 137 aaKnown RBP14.21□□□□□ -0.13
CLK3-207ENST00000562389 SLC34A1Q06495 639 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 CARTPTQ16568 116 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 FAM57BQ71RH2 274 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 OR2T27Q8NH04 317 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 YIPF5Q969M3 257 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 APOL4Q9BPW4 351 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 SLC30A2Q9BRI3 323 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 TTTY10Q9BZA0 68 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 EGLN1Q9GZT9 426 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 OR10A2Q9H208 303 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 CHODLQ9H9P2 273 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 RNPEPL1Q9HAU8 725 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 N6AMT1Q9Y5N5 214 aa14.21□□□□□ -0.13
CLK3-207ENST00000562389 HIVEP1P15822 2718 aa14.21□□□□□ -0.14
CLK3-207ENST00000562389 A0A1B0GWJ7 208 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ACOD1A6NK06 481 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 LYNX1G3V0Z9 82 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 PSMD9O00233 223 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 TPD52L2O43399 206 aaKnown RBP14.2□□□□□ -0.14
CLK3-207ENST00000562389 LYNX1P0DP58 116 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 TNFSF4P23510 183 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 CFL1P23528 166 aaKnown RBP14.2□□□□□ -0.14
CLK3-207ENST00000562389 COL8A2P25067 703 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ATP6V1E1P36543 226 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 NR4A2P43354 598 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 PRSS12P56730 875 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 TNFAIP6P98066 277 aaPredicted RBP14.2□□□□□ -0.14
CLK3-207ENST00000562389 RIN1Q13671 783 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 TIGD6Q17RP2 521 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ZNF691Q5VV52 312 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 TTC23Q5W5X9 447 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ZNF540Q8NDQ6 660 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 BHLHE23Q8NDY6 225 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 OR2Z1Q8NG97 314 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 OR13G1Q8NGZ3 307 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 RNFT2Q96EX2 444 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ELMOD3Q96FG2 381 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 REEP6Q96HR9 211 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 PGAM5Q96HS1 289 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 Q96MT0 163 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 VCXQ9H320 206 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 RGCCQ9H4X1 137 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 BRD7Q9NPI1 651 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 FAM206AQ9NX38 181 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 ZNF319Q9P2F9 582 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 AASSQ9UDR5 926 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 IKZF2Q9UKS7 526 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 CELSR1Q9NYQ6 3014 aa14.2□□□□□ -0.14
CLK3-207ENST00000562389 IGHV1-69-2A0A0G2JMI3 117 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 A0A1W2PQL4 384 aaPredicted RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 GGT3PA6NGU5 568 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 CD300LBA8K4G0 201 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 H0YHG0 523 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 SMAD7O15105 426 aaKnown RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 LILRA1O75019 489 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 RP2O75695 350 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 APOL3O95236 402 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 CRYBB2P43320 205 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 ADARB1P78563 741 aaKnown RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 LOXL1Q08397 574 aaPredicted RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 ZNF829Q3KNS6 432 aaPredicted RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 SSX6Q7RTT6 188 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 DHRSXQ8N5I4 330 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 OR10H4Q8NGA5 316 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 APH1BQ8WW43 257 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 SPRYD4Q8WW59 207 aaPredicted RBP14.19□□□□□ -0.14
CLK3-207ENST00000562389 CYGBQ8WWM9 190 aa14.19□□□□□ -0.14
CLK3-207ENST00000562389 SGK3Q96BR1 496 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms