RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 OR2T33Q8NG76 320 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 OR2AE1Q8NHA4 323 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 FAM216AQ8WUB2 273 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 SPRYD4Q8WW59 207 aaPredicted RBP8.62□□□□□ -1.03
CLK3-205ENST00000561673 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 DVL3Q92997 716 aaPredicted RBP8.62□□□□□ -1.03
CLK3-205ENST00000561673 CCDC124Q96CT7 223 aaKnown RBP8.62□□□□□ -1.03
CLK3-205ENST00000561673 ASB9Q96DX5 294 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 NIPSNAP1Q9BPW8 284 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 TMEM246Q9BRR3 403 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 CHID1Q9BWS9 393 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 SUCNR1Q9BXA5 334 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 TAS2R1Q9NYW7 299 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 PRPF19Q9UMS4 504 aaKnown RBP8.62□□□□□ -1.03
CLK3-205ENST00000561673 BAIAP2Q9UQB8 552 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 INSIG2Q9Y5U4 225 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 AUP1Q9Y679 476 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 COMMD3-BMI1R4GMX3 469 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CD300LBA8K4G0 201 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 ACOT8O14734 319 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 FSTL3O95633 263 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 SPARCP09486 303 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 RAP2AP10114 183 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CA6P23280 308 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CPT2P23786 658 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 FPR2P25090 351 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CD80P33681 288 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CD200P41217 278 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 ENTPD1P49961 510 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 PAX2Q02962 417 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 PAX8Q06710 450 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 MPPED2Q15777 294 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 ZNF404Q494X3 552 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 KLF17Q5JT82 389 aaPredicted RBP8.61□□□□□ -1.03
CLK3-205ENST00000561673 TEX30Q5JUR7 227 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 GLYATL3Q5SZD4 288 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 DRAM2Q6UX65 266 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CD300LDQ6UXZ3 194 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 MRPL21Q7Z2W9 205 aaKnown RBP8.61□□□□□ -1.03
CLK3-205ENST00000561673 KLBQ86Z14 1044 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 C1orf87Q8N0U7 546 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 BPIFB2Q8N4F0 458 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 OR10G2Q8NGC3 310 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 OR6K6Q8NGW6 343 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 Q8TCH9 128 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 POP5Q969H6 163 aaKnown RBP8.61□□□□□ -1.03
CLK3-205ENST00000561673 SLAMF6Q96DU3 332 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 LRGUKQ96M69 825 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 FEVQ99581 238 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 COPS4Q9BT78 406 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 THTPAQ9BU02 230 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
CLK3-205ENST00000561673 C1orf21Q9H246 121 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 CENPMQ9NSP4 180 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 MIOXQ9UGB7 285 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 LRCH1Q9Y2L9 728 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
CLK3-205ENST00000561673 DHRS12A0PJE2 317 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 GGT3PA6NGU5 568 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 RIIAD1A6NNX1 92 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 TRIM77I1YAP6 450 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 GMDSO60547 372 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 FAM20BO75063 409 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 CST1P01037 141 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 IFNGP01579 166 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 SLC2A1P11166 492 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 IRF2P14316 349 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 RPS2P15880 293 aaKnown RBP8.6□□□□□ -1.03
CLK3-205ENST00000561673 ZNF3P17036 446 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 PRKXP51817 358 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 RAD23AP54725 363 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
CLK3-205ENST00000561673 TAF13Q15543 124 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 OR8G1Q15617 311 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 OCLNQ16625 522 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 ARMCX4Q5H9R4 360 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 LINC01590Q5TEZ4 76 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 PRAMEF6Q5VXH4 476 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 C12orf54Q6X4T0 127 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 SPATC1Q76KD6 591 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 TMEM179BQ7Z7N9 219 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 ADGRG5Q8IZF4 528 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 IQCF1Q8N6M8 205 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 ZDHHC22Q8N966 263 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 C19orf18Q8NEA5 215 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 GIPC3Q8TF64 312 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 ERGIC1Q969X5 290 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 JMJD8Q96S16 334 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 KCNJ15Q99712 375 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 MRI1Q9BV20 369 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 SLC22A4Q9H015 551 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 MED20Q9H944 212 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 NTN4Q9HB63 628 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 CMC2Q9NRP2 79 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 UFSP2Q9NUQ7 469 aa8.6□□□□□ -1.03
CLK3-205ENST00000561673 MRPL15Q9P015 296 aaKnown RBP8.6□□□□□ -1.03
CLK3-205ENST00000561673 ZNF69Q9UC07 566 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms