RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ASRGL1Q7L266 308 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
CCDC113-203ENST00000561517 ZMYND19Q96E35 227 aaPredicted RBP13.05□□□□□ -0.32
CCDC113-203ENST00000561517 MDFIQ99750 246 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 KIF17Q9P2E2 1029 aa13.05□□□□□ -0.32
CCDC113-203ENST00000561517 FBN1P35555 2871 aaKnown RBP13.05□□□□□ -0.32
CCDC113-203ENST00000561517 ISPDA4D126 451 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 CD300LBA8K4G0 201 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 F5H5P2 479 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 TMEM178BH3BS89 294 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 SLC2A5P22732 501 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 FASP25445 335 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 RBMXP38159 391 aaKnown RBP13.04□□□□□ -0.32
CCDC113-203ENST00000561517 GATA4P43694 442 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 MMP16P51512 607 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 ESRRGP62508 458 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 TMEM155Q4W5P6 130 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 GLYATL3Q5SZD4 288 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 LRRC28Q86X40 367 aaPredicted RBP13.04□□□□□ -0.32
CCDC113-203ENST00000561517 CELF2-AS1Q8N7Q2 184 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 OTOSQ8NHW6 89 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 PLEKHA8Q96JA3 519 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 AMELYQ99218 206 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 G6PC2Q9NQR9 355 aa13.04□□□□□ -0.32
CCDC113-203ENST00000561517 SVEP1Q4LDE5 3571 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 XRCC2O43543 280 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 PLPP2O43688 288 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 APOC1P02654 83 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 HLA-DPB1P04440 258 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 SBK2P0C263 348 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 SLC2A1P11166 492 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 FCGR1AP12314 374 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 OPRL1P41146 370 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 CD200P41217 278 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 BTG1P62324 171 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 MAB21L1Q13394 359 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 PTGES3Q15185 160 aaKnown RBP13.03□□□□□ -0.32
CCDC113-203ENST00000561517 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 KLHL12Q53G59 568 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 KDM4DQ6B0I6 523 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 SPATC1Q76KD6 591 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 CXXC5Q7LFL8 322 aaKnown RBP13.03□□□□□ -0.32
CCDC113-203ENST00000561517 PRSS45Q7RTY3 260 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 SPRYD4Q8WW59 207 aaPredicted RBP13.03□□□□□ -0.32
CCDC113-203ENST00000561517 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 TVP23BQ9NYZ1 205 aa13.03□□□□□ -0.32
CCDC113-203ENST00000561517 CUBNO60494 3623 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 GGT3PA6NGU5 568 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 G3V2T6 193 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 SELENOFO60613 162 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 CIB2O75838 187 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 LYNP07948 512 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 HSD11B1P28845 292 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 CX3CR1P49238 355 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 AMIGO2Q86SJ2 522 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 ZNF420Q8TAQ5 688 aaPredicted RBP13.02□□□□□ -0.33
CCDC113-203ENST00000561517 LRTOMTQ8WZ04 291 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 SP140LQ9H930 580 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 PATZ1Q9HBE1 687 aaKnown RBP13.02□□□□□ -0.33
CCDC113-203ENST00000561517 KRT84Q9NSB2 600 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.33
CCDC113-203ENST00000561517 NOP16Q9Y3C1 178 aaKnown RBP13.02□□□□□ -0.33
CCDC113-203ENST00000561517 GMDSO60547 372 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 MITFO75030 526 aaPredicted RBP13.01□□□□□ -0.33
CCDC113-203ENST00000561517 FSTL3O95633 263 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 PTBP3O95758 552 aaKnown RBP13.01□□□□□ -0.33
CCDC113-203ENST00000561517 CA6P23280 308 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
CCDC113-203ENST00000561517 PMELP40967 661 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 RAD23AP54725 363 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 EFNB1P98172 346 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 APOFQ13790 326 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 KLHL36Q8N4N3 616 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 Q8TCH9 128 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 TEAD3Q99594 435 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 MRPL15Q9P015 296 aaKnown RBP13.01□□□□□ -0.33
CCDC113-203ENST00000561517 PCDHB10Q9UN67 800 aa13.01□□□□□ -0.33
CCDC113-203ENST00000561517 STAB1Q9NY15 2570 aa13□□□□□ -0.33
CCDC113-203ENST00000561517 IGHV3-64DA0A0J9YX35 117 aa13□□□□□ -0.33
CCDC113-203ENST00000561517 CCDC182A6NF36 153 aa13□□□□□ -0.33
CCDC113-203ENST00000561517 ZAR1LA6NP61 321 aa13□□□□□ -0.33
CCDC113-203ENST00000561517 F5H0A9 414 aaPredicted RBP13□□□□□ -0.33
CCDC113-203ENST00000561517 TBX1O43435 398 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms