RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 OR1L6Q8NGR2 347 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 OR6N2Q8NGY6 317 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 OR4L1Q8NH43 312 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 OR1F12Q8NHA8 337 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TCP10LQ8TDR4 215 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 NEK7Q8TDX7 302 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 CXorf40AQ8TE69 158 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PHF10Q8WUB8 498 aaKnown RBP3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PIK3R3Q92569 461 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TADA1Q96BN2 335 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF501Q96CX3 271 aaPredicted RBP3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PDXPQ96GD0 296 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 RNF170Q96K19 258 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 WFIKKN1Q96NZ8 548 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 SLC38A2Q96QD8 506 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TRIB3Q96RU7 358 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 MBOAT4Q96T53 435 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 LGMNQ99538 433 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 IL12RB2Q99665 862 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TIMM29Q9BSF4 260 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 BCL2L14Q9BZR8 327 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 UGT1A10Q9HAW8 530 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 VCX3AQ9NNX9 186 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 MYOZ1Q9NP98 299 aaPredicted RBP3.44□□□□□ -1.86
LRRC28-222ENST00000561431 SCRT2Q9NQ03 307 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 SIRT7Q9NRC8 400 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 C1orf109Q9NX04 203 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 MAT2BQ9NZL9 334 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 GNG12Q9UBI6 72 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 OPN4Q9UHM6 478 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PPP1R3CQ9UQK1 317 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 MEMO1Q9Y316 297 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 TMED7Q9Y3B3 224 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF175Q9Y473 711 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 POLR3HQ9Y535 204 aaPredicted RBP3.44□□□□□ -1.86
LRRC28-222ENST00000561431 OR1A2Q9Y585 309 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 ANKRD36A6QL64 1941 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 MAP1BP46821 2468 aaKnown RBP3.44□□□□□ -1.86
LRRC28-222ENST00000561431 PKD1L2Q7Z442 2459 aa3.44□□□□□ -1.86
LRRC28-222ENST00000561431 NBEAQ8NFP9 2946 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PI4KAP42356 2102 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PLXNB3Q9ULL4 1909 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 hCG_1818297A0A087WSY0 165 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 A0A1W2PQ67 120 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CCDC182A6NF36 153 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 BTNL10A8MVZ5 291 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 A8MX80 341 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 LMO7DNF2Z398 122 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 M0R3G1 203 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CCL24O00175 119 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 OR7A17O14581 309 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CHUKO15111 745 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 BET1O15155 118 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SGCEO43556 437 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CHST1O43916 411 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 AIREO43918 545 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NOS1APO75052 506 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SH3BGRLO75368 114 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FARS2O95363 451 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CRYZL1O95825 349 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 HPRP00739 348 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 JCHAINP01591 159 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 FGGP02679 453 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 HOXC4P09017 264 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 HBQ1P09105 142 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PET100P0DJ07 73 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF43P17038 809 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 RPL35AP18077 110 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CD1CP29017 333 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SLC1A1P43005 524 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CYB561P49447 251 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 STC1P52823 247 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PAX9P55771 341 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 AP1S2P56377 157 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 TMEM50BP56557 158 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 LSM6P62312 80 aaKnown RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DYNLT1P63172 113 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 GUCY2DQ02846 1103 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 STX4Q12846 297 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 AQP6Q13520 282 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 C1orf61Q13536 156 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PSG5Q15238 335 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 SPHARQ15513 63 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF74Q16587 644 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 DEFB133Q30KQ1 61 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF658BQ4V348 819 aaPredicted RBP3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ARMCX4Q5H9R4 360 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 HES3Q5TGS1 186 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 C1orf146Q5VVC0 180 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 C22orf42Q6IC83 251 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PWWP2BQ6NUJ5 590 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 PNCKQ6P2M8 343 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 NPSR1Q6W5P4 371 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 RFLNAQ6ZTI6 216 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CHMP1BQ7LBR1 199 aa3.43□□□□□ -1.86
LRRC28-222ENST00000561431 CPEB2Q7Z5Q1 589 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms