RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	NUFIP1	Q9UHK0	495 aa	Known RBP	10.54	□□□□□ -0.72
USP8-209	ENST00000560297	CLEC2D	Q9UHP7	191 aa		10.54	□□□□□ -0.72
USP8-209	ENST00000560297	DUSP13	Q9UII6	198 aa		10.54	□□□□□ -0.72
USP8-209	ENST00000560297	GPR160	Q9UJ42	338 aa		10.54	□□□□□ -0.72
USP8-209	ENST00000560297	LRCH1	Q9Y2L9	728 aa		10.54	□□□□□ -0.72
USP8-209	ENST00000560297	IGLV3-9	A0A075B6K5	115 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297		A0A0U1RQV5	110 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	TMEM129	A0AVI4	362 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	TBX1	O43435	398 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	SRSF10	O75494	262 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	PNP	P00491	289 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	IGHV3-13	P01766	116 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	RPSA	P08865	295 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	HTR1A	P08908	422 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ADRA2A	P08913	450 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	DANCR	P0C864	163 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	LIPA	P38571	399 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	KLF3	P57682	345 aa	Predicted RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	GABARAPL2	P60520	117 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ERVS71-1	P61550	626 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	TIGD6	Q17RP2	521 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	CCDC58	Q4VC31	144 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	SPATA46	Q5T0L3	261 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	BCL2L15	Q5TBC7	163 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	PGAP1	Q75T13	922 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	MRPL21	Q7Z2W9	205 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	DTX2	Q86UW9	622 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ELMOD2	Q8IZ81	293 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	NANOGP1	Q8N7R0	232 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	SPSB4	Q96A44	273 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	SGK3	Q96BR1	496 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	CMBL	Q96DG6	245 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	PELI1	Q96FA3	418 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	REPIN1	Q9BWE0	567 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ISG20L2	Q9H9L3	353 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ACOXL	Q9NUZ1	547 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	BABAM2	Q9NXR7	383 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	PTTG3P	Q9NZH4	202 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ERVK-18	Q9QC07	812 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	OR52A1	Q9UKL2	312 aa		10.53	□□□□□ -0.72
USP8-209	ENST00000560297	UTP20	O75691	2785 aa	Known RBP	10.53	□□□□□ -0.72
USP8-209	ENST00000560297	ROS1	P08922	2347 aa		10.52	□□□□□ -0.72
USP8-209	ENST00000560297	MYL12B	O14950	172 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	KITLG	P21583	273 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	DDOST	P39656	456 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	TGM4	P49221	684 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	CCR9	P51686	369 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	WNT4	P56705	351 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	ZNF92	Q03936	586 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	PSG7	Q13046	419 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	GK2	Q14410	553 aa	Predicted RBP	10.52	□□□□□ -0.73
USP8-209	ENST00000560297	MSMP	Q1L6U9	139 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	SWI5	Q1ZZU3	235 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	MST1L	Q2TV78	715 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	GLYATL3	Q5SZD4	288 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	OR2G6	Q5TZ20	316 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	CATSPERD	Q86XM0	798 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	OR8B12	Q8NGG6	310 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	OR2G2	Q8NGZ5	317 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.52	□□□□□ -0.73
USP8-209	ENST00000560297	GATAD2B	Q8WXI9	593 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	PIGT	Q969N2	578 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	REEP6	Q96HR9	211 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	SYT3	Q9BQG1	590 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	MND1	Q9BWT6	205 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	MRPL37	Q9BZE1	423 aa	Known RBP	10.52	□□□□□ -0.73
USP8-209	ENST00000560297	CCDC90B	Q9GZT6	254 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	G6PC2	Q9NQR9	355 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	ZNF319	Q9P2F9	582 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	CGGBP1	Q9UFW8	167 aa	Predicted RBP	10.52	□□□□□ -0.73
USP8-209	ENST00000560297	FZR1	Q9UM11	496 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	GTF2A1L	Q9UNN4	478 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	PMF1-BGLAP	U3KQ54	211 aa		10.52	□□□□□ -0.73
USP8-209	ENST00000560297	MTRF1	O75570	445 aa	Known RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	CLPTM1	O96005	669 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	SOD3	P08294	240 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	ATP6V1B1	P15313	513 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	MPV17	P39210	176 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	PSMB10	P40306	273 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	CHN2	P52757	468 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	TAS2R43	P59537	309 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	SNRPD2	P62316	118 aa	Known RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	MFGE8	Q08431	387 aa	Predicted RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	ALKBH1	Q13686	389 aa	Known RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	IRF3	Q14653	427 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	HLX	Q14774	488 aa	Predicted RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	KCTD21	Q4G0X4	260 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	TMEM244	Q5VVB8	128 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	RPL22L1	Q6P5R6	122 aa	Known RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	LRP11	Q86VZ4	500 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	ZNF485	Q8NCK3	441 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	CCDC54	Q8NEL0	328 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	SGCD	Q92629	289 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.51	□□□□□ -0.73
USP8-209	ENST00000560297	MS4A5	Q9H3V2	200 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	POFUT1	Q9H488	388 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	TRIM36	Q9NQ86	728 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	CYSLTR2	Q9NS75	346 aa		10.51	□□□□□ -0.73
USP8-209	ENST00000560297	FRRS1L	Q9P0K9	344 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms