RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 SERPINA1P01009 418 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 LIPEQ05469 1076 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 COX10Q12887 443 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 OXLD1Q5BKU9 147 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 DPY19L2P2Q6ZN68 376 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 C11orf44Q8N8P7 122 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 Q8TCH9 128 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 FAM162AQ96A26 154 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 RCN3Q96D15 328 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 TRIM15Q9C019 465 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 TRIM36Q9NQ86 728 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 IER3IP1Q9Y5U9 82 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 DNAH9Q9NYC9 4486 aa12.86□□□□□ -0.35
AC243562.3-201ENST00000559866 FAM20BO75063 409 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 RENP00797 406 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 LIPFP07098 398 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 ZNF26P17031 533 aaPredicted RBP12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 CD200P41217 278 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 DLX1P56177 255 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 HIST1H3AP68431 136 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 ECH1Q13011 328 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 MPPED2Q15777 294 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 GDPGP1Q6ZNW5 385 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 HIST2H3AQ71DI3 136 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 PGAP1Q75T13 922 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 MRPL21Q7Z2W9 205 aaKnown RBP12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 SCCPDHQ8NBX0 429 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 OR2AJ1Q8NGZ0 328 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 SLC7A13Q8TCU3 470 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 PITX2Q99697 317 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 SLC22A4Q9H015 551 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 CMTM6Q9NX76 183 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 FOXJ3Q9UPW0 622 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 ENPP4Q9Y6X5 453 aa12.85□□□□□ -0.35
AC243562.3-201ENST00000559866 A0A1B0GWJ7 208 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 UNC119BA6NIH7 251 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 F5H5K5 113 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 IMPA2O14732 288 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 SLC22A2O15244 555 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 TXNDC12O95881 172 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 LCATP04180 440 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 LOXL3P58215 753 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 ARF6P62330 175 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 DGCR6Q14129 220 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 OR8G1Q15617 311 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 MEP1BQ16820 701 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 METTL11BQ5VVY1 283 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 SLC35E4Q6ICL7 350 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 PTCHD4Q6ZW05 846 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 REC114Q7Z4M0 266 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 ATF6BQ99941 703 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 UFSP2Q9NUQ7 469 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 ZNRD1Q9P1U0 126 aa12.84□□□□□ -0.35
AC243562.3-201ENST00000559866 PTP4A3O75365 173 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 PPP1R3DO95685 299 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 SLC7A2P52569 658 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 TPTEP56180 551 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 HERPUD1Q15011 391 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 OR8B8Q15620 311 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 COLCA1Q6ZS62 124 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 LYG1Q8N1E2 194 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 RP9Q8TA86 221 aaKnown RBP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 FANK1Q8TC84 345 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 SLCO4A1Q96BD0 722 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 HOPXQ9BPY8 73 aaPredicted RBP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 ADAT1Q9BUB4 502 aaKnown RBP12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 RNF7Q9UBF6 113 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
AC243562.3-201ENST00000559866 IGLV1-36A0A0B4J1U3 117 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 TRAV38-1A0A0B4J264 116 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 A0A1B0GW55 424 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 LGALS8O00214 317 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 GPR37O15354 613 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 ADAM20O43506 726 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 NDUFA2O43678 99 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 OR10H3O60404 316 aa12.82□□□□□ -0.36
AC243562.3-201ENST00000559866 HLA-DQA2P01906 255 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms