RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	SLC29A1	Q99808	456 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	EGLN1	Q9GZT9	426 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SP140L	Q9H930	580 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CHODL	Q9H9P2	273 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849	VCX3A	Q9NNX9	186 aa		11.64	□□□□□ -0.55
CHRNB4-204	ENST00000559849		A0A096LNT2	108 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	H2BFM	P0C1H6	154 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SELE	P16581	610 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ACHE	P22303	614 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OPRL1	P41146	370 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CRYBB2	P43320	205 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TMEM33	P57088	247 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CDK5R2	Q13319	367 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	RIN1	Q13671	783 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZIK1	Q3SY52	487 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CLEC9A	Q6UXN8	241 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	PGAP1	Q75T13	922 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZNF582	Q96NG8	517 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SAP30L	Q9HAJ7	183 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HAO2	Q9NYQ3	351 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TMEM14A	Q9Y6G1	99 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	USF1	P22415	310 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HCCS	P53701	268 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GGTLC2	Q14390	218 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SNAI3	Q3KNW1	292 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	KCTD18	Q6PI47	426 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	USP51	Q70EK9	711 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR8G5	Q8NG78	346 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CNN2	Q99439	309 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	BPESC1	Q9GZL8	116 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	IMPAD1	Q9NX62	359 aa		11.63	□□□□□ -0.55
CHRNB4-204	ENST00000559849	IGHV1-69-2	A0A0G2JMI3	117 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	IQCF6	A8MYZ5	107 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LY6G6D	O95868	133 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CD55	P08174	381 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MRPL3	P09001	348 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SLC2A1	P11166	492 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TNFSF4	P23510	183 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CX3CR1	P49238	355 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	DEGS2	Q6QHC5	323 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849		Q6ZR03	302 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MRPL21	Q7Z2W9	205 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR5AS1	Q8N127	324 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GALNT4	Q8N4A0	578 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR13G1	Q8NGZ3	307 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	RFK	Q969G6	155 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MNT	Q99583	582 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NIPAL2	Q9H841	368 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	WARS2	Q9UGM6	360 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	N6AMT1	Q9Y5N5	214 aa		11.62	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CDC14B	O60729	498 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ANXA2	P07355	339 aa	Known RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZNF92	Q03936	586 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	KRT77	Q7Z794	578 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR2Z1	Q8NG97	314 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR52H1	Q8NGJ2	320 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ASB17	Q8WXJ9	295 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	YIPF5	Q969M3	257 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ELMOD3	Q96FG2	381 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	REPIN1	Q9BWE0	567 aa	Known RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MRO	Q9BYG7	248 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OPA3	Q9H6K4	179 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	DNAJC27	Q9NZQ0	273 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	IL19	Q9UHD0	177 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	KLHDC2	Q9Y2U9	406 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SON	P18583	2426 aa	Known RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849		E9PQ18	207 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	XRCC2	O43543	280 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ATP6V1G1	O75348	118 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HEXA	P06865	529 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HTR1F	P30939	366 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TNFAIP6	P98066	277 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	HFE	Q30201	348 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GLYATL3	Q5SZD4	288 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	LRRN1	Q6UXK5	716 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	BHLHE23	Q8NDY6	225 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	OR2AE1	Q8NHA4	323 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	UBE2F	Q969M7	185 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SLC30A2	Q9BRI3	323 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ADGRL4	Q9HBW9	690 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TMEM100	Q9NV29	134 aa		11.61	□□□□□ -0.55
CHRNB4-204	ENST00000559849	RP2	O75695	350 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SBK2	P0C263	348 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TNFRSF1A	P19438	455 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GPR6	P46095	362 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	ZNF121	P58317	390 aa	Predicted RBP	11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	POU4F2	Q12837	409 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TMED1	Q13445	227 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	TMEM249	Q2WGJ8	235 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	SLC25A30	Q5SVS4	291 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	PRSS45	Q7RTY3	260 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	PPP1R14B	Q96C90	147 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	MBOAT4	Q96T53	435 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	GMPPB	Q9Y5P6	360 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	C2CD3	Q4AC94	2353 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	NF1	P21359	2839 aa		11.6	□□□□□ -0.55
CHRNB4-204	ENST00000559849	C5orf63	A6NC05	138 aa		11.59	□□□□□ -0.55
CHRNB4-204	ENST00000559849	CD300LB	A8K4G0	201 aa		11.59	□□□□□ -0.55

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