RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 IGLV1-36A0A0B4J1U3 117 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 IGHV1-69DA0A0B4J2H0 117 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CENPVL3A0A0U1RRI6 287 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 GGT3PA6NGU5 568 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CD300LBA8K4G0 201 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 DCTN6O00399 190 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 ADAM20O43506 726 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 IDH3BO43837 385 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 PPP1R3DO95685 299 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 IGHV1-69P01742 117 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 ZNF823P16415 610 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CA6P23280 308 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SLC6A6P31641 620 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 IFNGR2P38484 337 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SLC7A2P52569 658 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SRSF4Q08170 494 aaKnown RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SF3A3Q12874 501 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 TRAP1Q12931 704 aaKnown RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 MPPED2Q15777 294 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CLEC12AQ5QGZ9 265 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 PRAMEF6Q5VXH4 476 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 RUSC1-AS1Q66K80 236 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SLC18B1Q6NT16 456 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 NAA40Q86UY6 237 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 LINC00346Q8IVM7 164 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 BOLLQ8N9W6 283 aaKnown RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SCCPDHQ8NBX0 429 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 C19orf18Q8NEA5 215 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SLC26A10Q8NG04 563 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 UBE2FQ969M7 185 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 SPTSSAQ969W0 71 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 NMNAT3Q96T66 252 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 KCTD14Q9BQ13 255 aaPredicted RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 IFT27Q9BW83 186 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 NSRP1Q9H0G5 558 aaKnown RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 DPAGT1Q9H3H5 408 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CNTD2Q9H8S5 307 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 C14orf119Q9NWQ9 140 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 NDUFAF4Q9P032 175 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CYB5R1Q9UHQ9 305 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 KCNG2Q9UJ96 466 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 CAB39Q9Y376 341 aaPredicted RBP7.61□□□□□ -1.19
HDDC3-204ENST00000559834 FAM96BQ9Y3D0 163 aa7.61□□□□□ -1.19
HDDC3-204ENST00000559834 OOEPA6NGQ2 149 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 C3orf80F5H4A9 247 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 M0R135 149 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 NME4O00746 187 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 CCDC22O60826 627 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 PTBP3O95758 552 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 SFTPBP07988 381 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 COX4I1P13073 169 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 MMP9P14780 707 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 GRK5P34947 590 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 IER3P46695 156 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 GSK3BP49841 420 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 FXYD6P3P58550 94 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 ARF6P62330 175 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 RELBQ01201 579 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 TAF9Q16594 264 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 GLYATQ6IB77 296 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 GDPGP1Q6ZNW5 385 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 CFAP77Q6ZQR2 320 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 ZBTB46Q86UZ6 589 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 OR4C15Q8NGM1 316 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 OR4K13Q8NH42 304 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 OR52J3Q8NH60 311 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 LINC01006Q8NI28 216 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 NPRL2Q8WTW4 380 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 LRTOMTQ8WZ04 291 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 LHX4Q969G2 390 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 ZNF799Q96GE5 643 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 DMRTB1Q96MA1 342 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 TBX15Q96SF7 602 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 RBM4BQ9BQ04 359 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 TCF7L1Q9HCS4 588 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 RPRD1BQ9NQG5 326 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 MRPL15Q9P015 296 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 ARMCX1Q9P291 453 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 GMPR2Q9P2T1 348 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 CTSZQ9UBR2 303 aa7.6□□□□□ -1.19
HDDC3-204ENST00000559834 SAMD4AQ9UPU9 718 aaKnown RBP7.6□□□□□ -1.19
HDDC3-204ENST00000559834 TRBV4-1A0A0J9YWV2 114 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 hCG_1807616A0A1W2PRN6 198 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 BTBD17A6NE02 478 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 A6NLC8 198 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 BHLHE40O14503 412 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 GPR137BO60478 399 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 CLPXO76031 633 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 GADD45GO95257 159 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 GYPAP02724 150 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 GRPP07492 148 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 NCK1P16333 377 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 HIST1H1CP16403 213 aaKnown RBP7.59□□□□□ -1.19
HDDC3-204ENST00000559834 DDOSTP39656 456 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 PRSS12P56730 875 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 ZNF92Q03936 586 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 SEC23BQ15437 767 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 ASPHD2Q6ICH7 369 aa7.59□□□□□ -1.19
HDDC3-204ENST00000559834 DRAM2Q6UX65 266 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms