RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 IL20Q9NYY1 176 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 ACTR3BQ9P1U1 418 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 BAIAP2Q9UQB8 552 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 IGHV3-64DA0A0J9YX35 117 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 KIR2DS1A0A191URI9 304 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 GGT3PA6NGU5 568 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 CD300LBA8K4G0 201 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 CLDN34H7C241 214 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 FAM20BO75063 409 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 CCNB2O95067 398 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 IFNGP01579 166 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 RNASE1P07998 156 aaKnown RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 FMO3P31513 532 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 OTX1P32242 354 aaPredicted RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 PYCR1P32322 319 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 RBMXP38159 391 aaKnown RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 BPIFB3P59826 476 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 PAX2Q02962 417 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 MAB21L1Q13394 359 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 CD276Q5ZPR3 534 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 SHISA2Q6UWI4 295 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 CYB561A3Q8NBI2 242 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 OR9Q2Q8NGE9 314 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 NUDT16L1Q9BRJ7 211 aaKnown RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 BTBD10Q9BSF8 475 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 COPS4Q9BT78 406 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 ADAT1Q9BUB4 502 aaKnown RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 MAGIXQ9H6Y5 334 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 SP140LQ9H930 580 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 ARL8BQ9NVJ2 186 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 MRPL15Q9P015 296 aaKnown RBP10.25□□□□□ -0.77
SPG11-219ENST00000559822 KIF17Q9P2E2 1029 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 COMMD3-BMI1R4GMX3 469 aa10.25□□□□□ -0.77
SPG11-219ENST00000559822 TRAV40A0A0B4J280 105 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 TVP23AA6NH52 213 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 ZNF878C9JN71 531 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 XRCC2O43543 280 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 NDUFA2O43678 99 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 ENSAO43768 121 aaKnown RBP10.24□□□□□ -0.77
SPG11-219ENST00000559822 PLATP00750 562 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 SPARCP09486 303 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 CA6P23280 308 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 DDOSTP39656 456 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 PMELP40967 661 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 MAGEA2P43356 314 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 SLC15A1P46059 708 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 ENTPD1P49961 510 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 PRSS12P56730 875 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 GNGT1P63211 74 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 WDR25Q64LD2 544 aaPredicted RBP10.24□□□□□ -0.77
SPG11-219ENST00000559822 CYP2R1Q6VVX0 501 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 DCXRQ7Z4W1 244 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 NAA40Q86UY6 237 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
SPG11-219ENST00000559822 LNX2Q8N448 690 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 SLC37A3Q8NCC5 494 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 OR2T33Q8NG76 320 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 DACT3Q96B18 629 aaPredicted RBP10.24□□□□□ -0.77
SPG11-219ENST00000559822 DDOQ99489 341 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 ZNF747Q9BV97 191 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 TSSK6Q9BXA6 273 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
SPG11-219ENST00000559822 REEP1Q9H902 201 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 UFSP2Q9NUQ7 469 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 C14orf119Q9NWQ9 140 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 ERVK-18Q9QC07 812 aa10.24□□□□□ -0.77
SPG11-219ENST00000559822 DOCK11Q5JSL3 2073 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 TRAV38-1A0A0B4J264 116 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 RIIAD1A6NNX1 92 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 LGALS8O00214 317 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 PTBP3O95758 552 aaKnown RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 GASTP01350 101 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 APOC1P02654 83 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 LIPFP07098 398 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 ZNF3P17036 446 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 ATP6V1B2P21281 511 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 PSMB10P40306 273 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 RPS27P42677 84 aaKnown RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 SLC25A1P53007 311 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 GRB2P62993 217 aaKnown RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 IL13RA1P78552 427 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 ZNF92Q03936 586 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 DBPQ10586 325 aaPredicted RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 CRMP1Q14194 572 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 GK3PQ14409 553 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 SNAI3Q3KNW1 292 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 FAM98BQ52LJ0 330 aaKnown RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 TEX30Q5JUR7 227 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 FAM201AQ5SY85 155 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 GPR157Q5UAW9 335 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 PRAMEF6Q5VXH4 476 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 ZNF770Q6IQ21 691 aaPredicted RBP10.23□□□□□ -0.77
SPG11-219ENST00000559822 PIGWQ7Z7B1 504 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 DHFR2Q86XF0 187 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 FITM2Q8N6M3 262 aa10.23□□□□□ -0.77
SPG11-219ENST00000559822 AQP11Q8NBQ7 271 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms