RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KCNJ8Q15842 424 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 SLC36A3Q495N2 470 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 CD276Q5ZPR3 534 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 C17orf107Q6ZR85 190 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 PGAP1Q75T13 922 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 SSMEM1Q8WWF3 244 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 NMNAT3Q96T66 252 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 PITX2Q99697 317 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 KCTD14Q9BQ13 255 aaPredicted RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 ADAT1Q9BUB4 502 aaKnown RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 SLC22A4Q9H015 551 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 OR52D1Q9H346 318 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 FN3KRPQ9HA64 309 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 SRA1Q9HD15 236 aaKnown RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 TRIM36Q9NQ86 728 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 RPRD1BQ9NQG5 326 aaKnown RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 RNF7Q9UBF6 113 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 FAM32AQ9Y421 112 aaKnown RBP10.86□□□□□ -0.67
TPM1-220ENST00000559556 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 CLPSL1A2RUU4 121 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 M0R135 149 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 LGALS8O00214 317 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 GMDSO60547 372 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 TOX4O94842 621 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 DIRAS1O95057 198 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 LCATP04180 440 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 HIST1H1CP16403 213 aaKnown RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 CA6P23280 308 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 SLC6A6P31641 620 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 OTX1P32242 354 aaPredicted RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 TPTEP56180 551 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 HOXA4Q00056 320 aaPredicted RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 ZNF620Q6ZNG0 422 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 MRPL21Q7Z2W9 205 aaKnown RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 NAA40Q86UY6 237 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 FAM86B1Q8N7N1 296 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 PLPP7Q8NBV4 271 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 GATAD2BQ8WXI9 593 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 DYRK2Q92630 601 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 ZNF799Q96GE5 643 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 WDFY2Q96P53 400 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 SIRPDQ9H106 197 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 SMURF1Q9HCE7 757 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 ACOXLQ9NUZ1 547 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 DCAF13Q9NV06 445 aaKnown RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 MRPL22Q9NWU5 206 aaKnown RBP10.85□□□□□ -0.67
TPM1-220ENST00000559556 FAM53CQ9NYF3 392 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 ERVK-18Q9QC07 812 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 KCNG2Q9UJ96 466 aa10.85□□□□□ -0.67
TPM1-220ENST00000559556 A0A0G2JK05 382 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 OR6C68A6NDL8 312 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 TIMM23O14925 209 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 ADAM20O43506 726 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 NDUFA2O43678 99 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 FCN3O75636 299 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 NUDT2P50583 147 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 PDCD1Q15116 288 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 RFX4Q33E94 735 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 C11orf91Q3C1V1 193 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 SNAI3Q3KNW1 292 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 METTL11BQ5VVY1 283 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 RHOUQ7L0Q8 258 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 OR4K13Q8NH42 304 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 OR52J3Q8NH60 311 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 MAP6Q96JE9 813 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 TRIM15Q9C019 465 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 MMP27Q9H306 513 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 FN3KQ9H479 309 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 CCDC134Q9H6E4 229 aa10.84□□□□□ -0.67
TPM1-220ENST00000559556 SAMD4AQ9UPU9 718 aaKnown RBP10.84□□□□□ -0.67
TPM1-220ENST00000559556 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 OOEPA6NGQ2 149 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 M0QZ24 198 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 IDH3BO43837 385 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 SEMG1P04279 462 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 ANOS1P23352 680 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 ZNF92Q03936 586 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 SFRP4Q6FHJ7 346 aaPredicted RBP10.83□□□□□ -0.68
TPM1-220ENST00000559556 LDLRAD3Q86YD5 345 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 SDR9C7Q8NEX9 313 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 OR2AE1Q8NHA4 323 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 TBC1D15Q8TC07 691 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 SPTSSAQ969W0 71 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
TPM1-220ENST00000559556 MRPL15Q9P015 296 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms