RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 YIPF7Q8N8F6 280 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ITFG2Q969R8 447 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 MRPL48Q96GC5 212 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SP140LQ9H930 580 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 BABAM2Q9NXR7 383 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 FRRS1LQ9P0K9 344 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 GRIP1Q9Y3R0 1128 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ROS1P08922 2347 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 A0A1B0GTI1 187 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 OR4C45A6NMZ5 311 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 MT-ND5P03915 603 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 CD1AP06126 327 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 CCNOP22674 350 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 EVX1P49640 407 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 WNT4P56705 351 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 PPP1CBP62140 327 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 TNK1Q13470 666 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 TAF13Q15543 124 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 EFNB3Q15768 340 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 MST1LQ2TV78 715 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF773Q6PK81 442 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 SLC22A25Q6T423 547 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 UNQ6126/PRO20091Q6UXV3 157 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 DTX2Q86UW9 622 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 OR8B12Q8NGG6 310 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 PPP1R14AQ96A00 147 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 DHRS9Q9BPW9 319 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 ACOT13Q9NPJ3 140 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 EIF3KQ9UBQ5 218 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 SPEF1Q9Y4P9 236 aa12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 SIRT4Q9Y6E7 314 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-207ENST00000559309 LOC390937A0A1W2PQ73 354 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 J3QLW9 94 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 HS3ST1O14792 307 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 XRCC2O43543 280 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 IGHV3-13P01766 116 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 LCATP04180 440 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 ISG15P05161 165 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 SLC2A1P11166 492 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 RAC2P15153 192 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 ZNF19P17023 458 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 KITLGP21583 273 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 CDH15P55291 814 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 RPS23P62266 143 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 GK2Q14410 553 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 CDK5R1Q15078 307 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OR8B8Q15620 311 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 SWI5Q1ZZU3 235 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 WDR38Q5JTN6 314 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 GLYATL3Q5SZD4 288 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 C11orf71Q6IPW1 123 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 FAM220AQ7Z4H9 259 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OR1J1Q8NGS3 322 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 ABHD4Q8TB40 342 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 SLC25A40Q8TBP6 338 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 KLF14Q8TD94 323 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 MRPL24Q96A35 216 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OR5M11Q96RB7 305 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 KCNS3Q9BQ31 491 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 MND1Q9BWT6 205 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OR2J1Q9GZK6 312 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OPA3Q9H6K4 179 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 ERGIC3Q9Y282 383 aa12.7□□□□□ -0.38
SNRPA1-207ENST00000559309 TACC2O95359 2948 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 hCG_38984A0A1B0GV85 526 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 LOC110117498-PIK3R3F6TDL0 507 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 PLPP2O43688 288 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 CD8AP01732 235 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 PRF1P14222 555 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 SSTR2P30874 369 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 MPV17P39210 176 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 PSMB10P40306 273 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 FAM3AP98173 230 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 ZNF92Q03936 586 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 PSG7Q13046 419 aa12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-207ENST00000559309 SPHARQ15513 63 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms