RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 BTN2A1Q7KYR7 527 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 LINC00346Q8IVM7 164 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 LRTOMTQ8WZ04 291 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 PITX2Q99697 317 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 TMEM120AQ9BXJ8 343 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 SLC22A4Q9H015 551 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 C16orf95Q9H693 158 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 GMPR2Q9P2T1 348 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 NOP16Q9Y3C1 178 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-205ENST00000559245 IGLV1-36A0A0B4J1U3 117 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 LOC100653049A0A140TA62 436 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 C5orf63A6NC05 138 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 OR10H3O60404 316 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 FCN3O75636 299 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 KRT34O76011 436 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 TXNDC12O95881 172 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 GYPAP02724 150 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 MDH1P40925 334 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 FXYD6P3P58550 94 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 ECH1Q13011 328 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 MAPRE2Q15555 327 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 DHRS7BQ6IAN0 325 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 SLC18B1Q6NT16 456 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 DPY19L2P2Q6ZN68 376 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 MRPL21Q7Z2W9 205 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 RSRC1Q96IZ7 334 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 HSH2DQ96JZ2 352 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 ATF6BQ99941 703 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 ADAT1Q9BUB4 502 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 SRA1Q9HD15 236 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 FAM96BQ9Y3D0 163 aa13.4□□□□□ -0.26
CDC42BPB-205ENST00000559245 CD300LBA8K4G0 201 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 DVL1O14640 695 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 GMDSO60547 372 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 ECDO95905 644 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 CSF1P09603 554 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 DBPQ10586 325 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 TRAP1Q12931 704 aaKnown RBP13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 CBLL1Q75N03 491 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 CYP4Z1Q86W10 505 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 OR6V1Q8N148 313 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 PLPP7Q8NBV4 271 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 C1orf123Q9NWV4 160 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 CMTM6Q9NX76 183 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 RPUSD1Q9UJJ7 312 aaKnown RBP13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 KPTNQ9Y664 436 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
CDC42BPB-205ENST00000559245 ZNF816-ZNF321PA0A0X1KG74 233 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 G3V4G9 280 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 CXCR6O00574 342 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 TSPAN9O75954 239 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 FBP1P09467 338 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 GGT2P36268 569 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 OMPP47874 163 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 TPTEP56180 551 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 POU4F2Q12837 409 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 BEAN1Q3B7T3 259 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 C11orf91Q3C1V1 193 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 ZNF826PQ6ZT77 177 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 TSEN54Q7Z6J9 526 aaKnown RBP13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 GCSAMQ8N6F7 178 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 OR2AJ1Q8NGZ0 328 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 ST8SIA4Q92187 359 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 ERMAPQ96PL5 475 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 SAR1AQ9NR31 198 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 ZNRD1Q9P1U0 126 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 VPREB3Q9UKI3 123 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
CDC42BPB-205ENST00000559245 A0A1B0GVI7 797 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 A0A1W2PRQ8 180 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 BTBD17A6NE02 478 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 GGT3PA6NGU5 568 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 UNC119BA6NIH7 251 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 M0R135 149 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 RENP00797 406 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 SERPINA1P01009 418 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 GRPP07492 148 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 ZNF92Q03936 586 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 EGR3Q06889 387 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 DGCR6Q14129 220 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 HSP90B2PQ58FF3 399 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 FGD3Q5JSP0 725 aa13.37□□□□□ -0.27
CDC42BPB-205ENST00000559245 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms