RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 PIFOQ8TCI5 191 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 ABHD3Q8WU67 409 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 C15orf40Q8WUR7 153 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 OR8D1Q8WZ84 308 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 NTAN1Q96AB6 310 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 TMIGD2Q96BF3 282 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 TM4SF18Q96CE8 201 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 FAM210BQ96KR6 192 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 UBE2E2Q96LR5 201 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 ZNF488Q96MN9 340 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 TIMM17AQ99595 171 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 SIKE1Q9BRV8 207 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 AGMATQ9BSE5 352 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 PRRG3Q9BZD7 231 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 OR52D1Q9H346 318 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 GAL3ST2Q9H3Q3 398 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 CLSTN2Q9H4D0 955 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 RPP21Q9H633 154 aaKnown RBP1.03□□□□□ -2.24
USP3-209ENST00000558925 ZNF442Q9H7R0 627 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 SYNDIG1Q9H7V2 258 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 CD209Q9NNX6 404 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 MYOZ1Q9NP98 299 aaPredicted RBP1.03□□□□□ -2.24
USP3-209ENST00000558925 AGPAT3Q9NRZ7 376 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 RGS18Q9NS28 235 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 RBFOX1Q9NWB1 397 aaKnown RBP1.03□□□□□ -2.24
USP3-209ENST00000558925 TBX21Q9UL17 535 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 SAR1BQ9Y6B6 198 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 MROH5Q6ZUA9 1318 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 TNS2Q63HR2 1409 aa1.03□□□□□ -2.24
USP3-209ENST00000558925 TRAV6A0A075B6T7 132 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IGKV6D-21A0A0A0MT36 114 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 A0A0B4J2E0 115 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IGHV1-69DA0A0B4J2H0 117 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IGHV5-10-1A0A0J9YXX1 117 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 OR6C74A6NCV1 312 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 A6NDN8 102 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TVP23AA6NH52 213 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 HACD1B0YJ81 288 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 NDUFC2-KCTD14E9PQ53 114 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 H7C0C1 242 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 K7EN84 100 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 DNASE2O00115 360 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 RRP8O43159 456 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 CTNSO60931 367 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 DYSFO75923 2080 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ETHE1O95571 254 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 GCGP01275 180 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 S100A9P06702 114 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 CTSLP07711 333 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ADRA2AP08913 450 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 OR8U9P0C7N5 309 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IGHV1-8P0DP01 117 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ADRB3P13945 408 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PSMC3P17980 439 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PGAM1P18669 254 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RAB3AP20336 220 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 RAB5AP20339 215 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 MAGP20916 626 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 WARSP23381 471 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 LOXP28300 417 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 LCN1P31025 176 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PFN2P35080 140 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SCN1AP35498 2009 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 LONP1P36776 959 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 POLR2IP36954 125 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 RBM34P42696 430 aaKnown RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 ETV1P50549 477 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 MNAT1P51948 309 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CCNG1P51959 295 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 GFERP55789 205 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CLDN6P56747 220 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SYNJ2BPP57105 145 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 HERVK_113P61574 105 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ESRRGP62508 458 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CDK5Q00535 292 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 LOXL1Q08397 574 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 SIGLEC14Q08ET2 396 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TFDP2Q14188 446 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 KIR2DS1Q14954 304 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 IRF4Q15306 451 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SHHQ15465 462 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SMUG1Q53HV7 270 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 FAM78AQ5JUQ0 283 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TPRG1LQ5T0D9 272 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 AADACL4Q5VUY2 407 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 C16orf87Q6PH81 154 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 TIFABQ6ZNK6 161 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 NTM-AS1Q6ZSK4 140 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SLC35D2Q76EJ3 337 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CDKL3Q8IVW4 592 aaPredicted RBP1.02□□□□□ -2.25
USP3-209ENST00000558925 ZNF695Q8IW36 515 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 WDFY1Q8IWB7 410 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 SLC30A8Q8IWU4 369 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PRSS58Q8IYP2 241 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ENTHD1Q8IYW4 607 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 PGAM4Q8N0Y7 254 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 ARHGAP18Q8N392 663 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CSGALNACT2Q8N6G5 542 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 OR6N1Q8NGY5 312 aa1.02□□□□□ -2.25
USP3-209ENST00000558925 CIRBP-AS1Q8TBR5 109 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms