RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ANXA8P13928 327 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PSMB5P28074 263 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 LOXP28300 417 aaPredicted RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 HMOX2P30519 316 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PEX19P40855 299 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 CRISP1P54107 249 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PPP1CBP62140 327 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 RBX1P62877 108 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PRR3P79522 188 aaKnown RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 BAMBIQ13145 260 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PSMD5Q16401 504 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ANXA8L1Q5VT79 327 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 TWF2Q6IBS0 349 aaKnown RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ADNP2Q6IQ32 1131 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM53Q6P2H8 277 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 SPESP1Q6UW49 350 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 MBOAT1Q6ZNC8 495 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF664Q8N3J9 261 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 PQLC3Q8N755 202 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ZFP41Q8N8Y5 198 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 TTC29Q8NA56 475 aaPredicted RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 OR5M1Q8NGP8 315 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 OR9G4Q8NGQ1 327 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 NUBPLQ8TB37 319 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM230Q96A57 120 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 DCPSQ96C86 337 aaKnown RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 RBBP8Q99708 897 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 BPIFA3Q9BQP9 254 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ANGPTL4Q9BY76 406 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ANKRD60Q9BZ19 345 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ZYG11BQ9C0D3 744 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 ACTR3CQ9C0K3 210 aaPredicted RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 MRPS30Q9NP92 439 aaKnown RBP1.55□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM9BQ9NQ34 198 aa1.55□□□□□ -2.16
VPS13C-207ENST00000558919 IGHV3-72A0A0B4J1Y9 119 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 A6NDN8 102 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 H0YC42 278 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 K7EMT4 169 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 EIF1BO60739 113 aaKnown RBP1.54□□□□□ -2.16
VPS13C-207ENST00000558919 CYB5R3P00387 301 aaPredicted RBP1.54□□□□□ -2.16
VPS13C-207ENST00000558919 IGHV3-11P01762 117 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 OR8G3PP0DMU2 310 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ERGP11308 486 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ATF6P18850 670 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 GGT1P19440 569 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 OR1E1P30953 314 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 EIF1P41567 113 aaKnown RBP1.54□□□□□ -2.16
VPS13C-207ENST00000558919 GFERP55789 205 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 STUMQ69YW2 141 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 GUSBP11Q6P575 273 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 NPSR1Q6W5P4 371 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 OFCC1Q8IZS5 231 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 JAGN1Q8N5M9 183 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 COMMD1Q8N668 190 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 NPWQ8N729 165 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 CHST4Q8NCG5 386 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF680Q8NEM1 530 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 OR10AD1Q8NGE0 317 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 AGR3Q8TD06 166 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 EEF1AKMT3Q96AZ1 226 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ECHDC3Q96DC8 303 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 PRRC1Q96M27 445 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF317Q96PQ6 595 aaPredicted RBP1.54□□□□□ -2.16
VPS13C-207ENST00000558919 GGTLC1Q9BX51 225 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 ELOVL6Q9H5J4 265 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 EDA2RQ9HAV5 297 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 C21orf62Q9NYP8 219 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 SIGLEC7Q9Y286 467 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 SAR1BQ9Y6B6 198 aa1.54□□□□□ -2.16
VPS13C-207ENST00000558919 TRAV25A0A0B4J276 109 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 A0A1B0GW55 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 A0A1W2PNN7 141 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 NCBP2LA6PVI3 153 aaKnown RBP1.53□□□□□ -2.16
VPS13C-207ENST00000558919 KRBOX1C9JBD0 128 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 H0YIV9 168 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DNAJB6O75190 326 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 RDH16O75452 317 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 FLOT1O75955 427 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 GLSO94925 669 aaPredicted RBP1.53□□□□□ -2.16
VPS13C-207ENST00000558919 CCNB2O95067 398 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 LSM8O95777 96 aaKnown RBP1.53□□□□□ -2.16
VPS13C-207ENST00000558919 CD160O95971 181 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 HBE1P02100 147 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 GLAP06280 429 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 ASGR1P07306 291 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DUX4L2P0CJ85 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DUX4L3P0CJ86 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DUX4L5P0CJ88 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DUX4L6P0CJ89 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 DUX4L7P0CJ90 424 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 CTRB1P17538 263 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 GSTM3P21266 225 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 U2AF2P26368 475 aaKnown RBP eCLIP1.53□□□□□ -2.16
VPS13C-207ENST00000558919 PRLHRP49683 370 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 SEMG2Q02383 582 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 ZNF235Q14590 738 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 ITIH4Q14624 930 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 NCF4Q15080 339 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 YIF1BQ5BJH7 314 aa1.53□□□□□ -2.16
VPS13C-207ENST00000558919 BEX5Q5H9J7 111 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms