RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 OR10W1Q8NGF6 305 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 OR8U1Q8NH10 309 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ASZ1Q8WWH4 475 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 FAM104AQ969W3 186 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 SGTBQ96EQ0 304 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 RNF145Q96MT1 663 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 RNF157Q96PX1 679 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 RGS18Q9NS28 235 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ZNF222Q9UK12 451 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 PSG11Q9UQ72 335 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 HES2Q9Y543 173 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 PIKFYVEQ9Y2I7 2098 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ZNFX1Q9P2E3 1918 aaKnown RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 A0A0J9YXV3 536 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 A0A0U1RQV1 116 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 ZNF99A8MXY4 864 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 H3BN98 237 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 H7C1H1 209 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 RAD51BO15315 384 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 CHST10O43529 356 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 SLC16A7O60669 478 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 LCA5LO95447 670 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 PTHP01270 115 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 KLK1P06870 262 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 OR56A5P0C7T3 313 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 NUP62P37198 522 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 CSKP41240 450 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 CCNG1P51959 295 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 OR2B8PP59922 312 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 PSMC5P62195 406 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 LOXL1Q08397 574 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 PPIDQ08752 370 aaKnown RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 RCAN2Q14206 197 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 ZNF266Q14584 549 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 GABRA6Q16445 453 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 HNRNPA1L2Q32P51 320 aaKnown RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 SMUG1Q53HV7 270 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 PRMT9Q6P2P2 845 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 ZFP2Q6ZN57 461 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 OR2W3Q7Z3T1 314 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 CDKL3Q8IVW4 592 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 UBALD2Q8IYN6 164 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 LINC00469Q8N7U9 141 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 GATSQ8NAP1 163 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 C19orf18Q8NEA5 215 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 OR6K6Q8NGW6 343 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 ZNF75CPQ92670 426 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 STARD4Q96DR4 205 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 NARS2Q96I59 477 aaKnown RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 ZNF317Q96PQ6 595 aaPredicted RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 AGMATQ9BSE5 352 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 PLA2G2FQ9BZM2 168 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
CASC4-206ENST00000558847 C1orf198Q9H425 327 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 ARMC7Q9H6L4 198 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 FLVCR2Q9UPI3 526 aa2.78□□□□□ -1.96
CASC4-206ENST00000558847 AQRO60306 1485 aaKnown RBP eCLIP2.77□□□□□ -1.97
CASC4-206ENST00000558847 CAMTA1Q9Y6Y1 1673 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 IGKV2D-24A0A075B6R9 120 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 HACD1B0YJ81 288 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 SPOPO43791 374 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 REM1O75628 298 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 ETHE1O95571 254 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 APCSP02743 223 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 ZNF688P0C7X2 276 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 PGA4P0DJD7 388 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 PGA3P0DJD8 388 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 C1GALT1C1LP0DN25 315 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 CD37P11049 281 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 IFITM3Q01628 133 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 TFDP3Q5H9I0 405 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 GCSAMLQ5JQS6 135 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 AP1ARQ63HQ0 302 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 RTL4Q6ZR62 310 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 FBXO36Q8NEA4 188 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 OR10G2Q8NGC3 310 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 OR13C9Q8NGT0 318 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 OR10Z1Q8NGY1 313 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 UBALD1Q8TB05 177 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 FAM131CQ96AQ9 280 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 TMEM175Q9BSA9 504 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 RSG1Q9BU20 258 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 GAL3ST2Q9H3Q3 398 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 RRAGDQ9NQL2 400 aaPredicted RBP2.77□□□□□ -1.97
CASC4-206ENST00000558847 ZNF355PQ9NSJ1 428 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 TREX1Q9NSU2 369 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 SLC17A7Q9P2U7 560 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 BZW2Q9Y6E2 419 aaKnown RBP2.77□□□□□ -1.97
CASC4-206ENST00000558847 ARHGAP21Q5T5U3 1957 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 NEURL4Q96JN8 1562 aa2.77□□□□□ -1.97
CASC4-206ENST00000558847 KIF27Q86VH2 1401 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 IGKV6D-21A0A0A0MT36 114 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 GSTTP1A0A1W2PQM5 241 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 TNFRSF11BO00300 401 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 SLC19A2O60779 497 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
CASC4-206ENST00000558847 UPK1BO75841 260 aa2.76□□□□□ -1.97
CASC4-206ENST00000558847 CATP04040 527 aaKnown RBP2.76□□□□□ -1.97
CASC4-206ENST00000558847 S100A9P06702 114 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms