RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 OR2T2Q6IF00 324 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 FAM166AQ6J272 317 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 LYPD4Q6UWN0 246 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 MEPCEQ7L2J0 689 aaKnown RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 SLC16A9Q7RTY1 509 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 MRPL21Q7Z2W9 205 aaKnown RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 NAA40Q86UY6 237 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 KLBQ86Z14 1044 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ZNF283Q8N7M2 679 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 CELF2-AS1Q8N7Q2 184 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 SPERTQ8NA61 448 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 OR2Z1Q8NG97 314 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 OR10S1Q8NGN2 331 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 TMEM163Q8TC26 289 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ASB17Q8WXJ9 295 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 YIPF5Q969M3 257 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ERGIC1Q969X5 290 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ZMYND19Q96E35 227 aaPredicted RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 SLC30A2Q9BRI3 323 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 SEMA6AQ9H2E6 1030 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 RGCCQ9H4X1 137 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 HAO2Q9NYQ3 351 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 LAMP5Q9UJQ1 280 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 OAZ3Q9UMX2 235 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 CHD3Q12873 2000 aaKnown RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 TLN2Q9Y4G6 2542 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 LOC100289279A0A1B0GTE1 492 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 A0A1B0GWJ7 208 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 GGT3PA6NGU5 568 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 CD300LBA8K4G0 201 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 B4DSR2 109 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 PHYHO14832 338 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 PRKYO43930 277 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 GMDSO60547 372 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 MITFO75030 526 aaPredicted RBP7.19□□□□□ -1.26
TPM1-213ENST00000558400 ZNF254O75437 659 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 CRLF1O75462 422 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 TGFAP01135 160 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 ALOX5APP20292 161 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 SLC2A5P22732 501 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 DCTDP32321 178 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 OPRL1P41146 370 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 CDC42P60953 191 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 POU4F2Q12837 409 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 TMED1Q13445 227 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 C6orf52Q5T4I8 152 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 C12orf73Q69YU5 71 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 GID4Q8IVV7 300 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 FTMTQ8N4E7 242 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 TCEANCQ8N8B7 351 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 LINC01356Q8N9X3 169 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 PLPP7Q8NBV4 271 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 OR8J1Q8NGP2 316 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 RFKQ969G6 155 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 RAB39BQ96DA2 213 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 MSI2Q96DH6 328 aaKnown RBP7.19□□□□□ -1.26
TPM1-213ENST00000558400 CIB1Q99828 191 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 PKP2Q99959 881 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 C9orf16Q9BUW7 83 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 MROQ9BYG7 248 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 OR10A2Q9H208 303 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 POFUT1Q9H488 388 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 USE1Q9NZ43 259 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 MRPL15Q9P015 296 aaKnown RBP7.19□□□□□ -1.26
TPM1-213ENST00000558400 LPAR3Q9UBY5 353 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 TMEFF2Q9UIK5 374 aaPredicted RBP7.19□□□□□ -1.26
TPM1-213ENST00000558400 ZNF391Q9UJN7 358 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 CDC42EP3Q9UKI2 254 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 KCNS2Q9ULS6 477 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 PPP1R3CQ9UQK1 317 aa7.19□□□□□ -1.26
TPM1-213ENST00000558400 FBN1P35555 2871 aaKnown RBP7.18□□□□□ -1.26
TPM1-213ENST00000558400 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.18□□□□□ -1.26
TPM1-213ENST00000558400 LRP5LA4QPB2 252 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 SAC3D1A6NKF1 404 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 LRRC30A6NM36 301 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 SNTNA6NMZ2 147 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 INAFM1C9JVW0 142 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 SELENOFO60613 162 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 FSTL3O95633 263 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 IFNA2P01563 188 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ALPLP05186 524 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ANXA2P07355 339 aaKnown RBP7.18□□□□□ -1.26
TPM1-213ENST00000558400 CX3CR1P49238 355 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ALDH3A2P51648 485 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 CDH15P55291 814 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ZNF92Q03936 586 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 TIGD6Q17RP2 521 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ZNF181Q2M3W8 571 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 CHRFAM7AQ494W8 412 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 TMEM255AQ5JRV8 349 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 AADACL4Q5VUY2 407 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 Q6ZR03 302 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 ZBTB49Q6ZSB9 765 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 KRT77Q7Z794 578 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 C1orf87Q8N0U7 546 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 OR5AS1Q8N127 324 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 CSNK2A3Q8NEV1 391 aa7.18□□□□□ -1.26
TPM1-213ENST00000558400 GTF3AQ92664 365 aaKnown RBP7.18□□□□□ -1.26
TPM1-213ENST00000558400 STMN2Q93045 179 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms