RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 WDR1O75083 606 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 IQCJQ1A5X6 159 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 RHNO1Q9BSD3 238 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 BARHL1Q9BZE3 327 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 POMT1Q9Y6A1 747 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 SPRY3O43610 288 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 SELENBP1Q13228 472 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 IHHQ14623 411 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 OR10P1Q8NGE3 313 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
SPG11-210ENST00000558319 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 ICOSLGO75144 302 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 GNG10P50151 68 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 HIST1H3AP68431 136 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 NEURL3Q96EH8 262 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 YTHDF2Q9Y5A9 579 aaKnown RBP12.68□□□□□ -0.38
SPG11-210ENST00000558319 SLCO1B1Q9Y6L6 691 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 LTBP3Q9NS15 1303 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 LOC107986453A0A1B0GWG9 222 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 XKRY2A2RUG3 117 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 LRRC30A6NM36 301 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■□□□ 13.3
SPG11-210ENST00000558319 PGFP49763 221 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 BTLAQ7Z6A9 289 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 C17orf78Q8N4C9 275 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 OR1J2Q8NGS2 313 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 BLACEA4D250 179 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 E5RGE8 158 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 HSBP1O75506 76 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 SPP1P10451 314 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 HIST1H1CP16403 213 aaKnown RBP12.68□□□□□ -0.38
SPG11-210ENST00000558319 RAB13P51153 203 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
SPG11-210ENST00000558319 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 BCL2L11O43521 198 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 RGS11O94810 467 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 WNT11O96014 354 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 CD14P08571 375 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 KIR2DL3P43628 341 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 CLDN10P78369 228 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 MIDNQ504T8 468 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 TMEM81Q6P7N7 255 aa12.68□□□□□ -0.38
SPG11-210ENST00000558319 CCDC187A0A096LP49 1063 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 CDC14BO60729 498 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 GALR1P47211 349 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ADPRHP54922 357 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 PPP1CBP62140 327 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 DUSP5Q16690 384 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 OR2AE1Q8NHA4 323 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ZNF71Q9NQZ8 489 aaPredicted RBP12.67□□□□□ -0.38
SPG11-210ENST00000558319 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
SPG11-210ENST00000558319 DRAM2Q6UX65 266 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 NHLRC2Q8NBF2 726 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 PPT2Q9UMR5 302 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 M0R082 166 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 GYPAP02724 150 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 RPL7P18124 248 aaKnown RBP12.67□□□□□ -0.38
SPG11-210ENST00000558319 SPINK9Q5DT21 86 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 NCMAPQ5T1S8 102 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 OR10AD1Q8NGE0 317 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 OR51F2Q8NH61 342 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 BLNKQ8WV28 456 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ZBTB42B2RXF5 422 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 H0YIV9 168 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ABCD4O14678 606 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 GPR37O15354 613 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
SPG11-210ENST00000558319 GLRA1P23415 457 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 PRSS12P56730 875 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 PIGPP57054 158 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 SPPL3Q8TCT6 385 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 DYRK2Q92630 601 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 ACER3Q9NUN7 267 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 PFN3P60673 137 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 TFAP2EQ6VUC0 442 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 BCO1Q9HAY6 547 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
SPG11-210ENST00000558319 BMP5P22003 454 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 EVX1P49640 407 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 HSD17B7P56937 341 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 GGTA1PQ4G0N0 100 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 SLC35D3Q5M8T2 416 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 FBXO17Q96EF6 278 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 PDLIM5Q96HC4 596 aaKnown RBP12.66□□□□□ -0.38
SPG11-210ENST00000558319 MED29Q9NX70 200 aa12.66□□□□□ -0.38
SPG11-210ENST00000558319 OR1A1Q9P1Q5 309 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms