RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 VRK1Q99986 396 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-234ENST00000557703 JAM3Q9BX67 310 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 OR51B6Q9H340 312 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 LRP12Q9Y561 859 aa11.71□□□□□ -0.53
SHMT2-234ENST00000557703 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 A0A1W2PQL4 384 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 METTL15A6NJ78 407 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 IFNL4K9M1U5 179 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 TIMM8AO60220 97 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 CLPTM1O96005 669 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ANXA2P07355 339 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 CD55P08174 381 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 DBTP11182 482 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 CDKN1AP38936 164 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 VHLP40337 213 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF81P51508 661 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF91Q05481 1191 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 MZT1Q08AG7 82 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 GK2Q14410 553 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 MRPL21Q7Z2W9 205 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 SYS1Q8N2H4 156 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 SPERTQ8NA61 448 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 CSNK2A3Q8NEV1 391 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 OR10H4Q8NGA5 316 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 NRG4Q8WWG1 115 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 PERPQ96FX8 193 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 AMELYQ99218 206 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 ABCB9Q9NP78 766 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 DLL4Q9NR61 685 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 PLCXD1Q9NUJ7 323 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 CNOT2Q9NZN8 540 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 NUFIP1Q9UHK0 495 aaKnown RBP11.7□□□□□ -0.54
SHMT2-234ENST00000557703 IKZF2Q9UKS7 526 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 SNX5Q9Y5X3 404 aa11.7□□□□□ -0.54
SHMT2-234ENST00000557703 LOC390937A0A1W2PQ73 354 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 DAPL1A0PJW8 107 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 EFCAB10A6NFE3 127 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 DHRS7CA6NNS2 312 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 GMDSO60547 372 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
SHMT2-234ENST00000557703 IGHA1P01876 353 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-234ENST00000557703 TNFRSF1AP19438 455 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 MPV17P39210 176 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 GALEQ14376 348 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 TIGD6Q17RP2 521 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 Q5PR19 223 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 SPATA46Q5T0L3 261 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF684Q5T5D7 378 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 CLEC2AQ6UVW9 174 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 DNM1P46Q6ZS02 220 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 KRT74Q7RTS7 529 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 FAM220AQ7Z4H9 259 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 APH1BQ8WW43 257 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 PGAM5Q96HS1 289 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-234ENST00000557703 MRPL15Q9P015 296 aaKnown RBP11.69□□□□□ -0.54
SHMT2-234ENST00000557703 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 COPS3Q9UNS2 423 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 R4GMQ9 66 aa11.69□□□□□ -0.54
SHMT2-234ENST00000557703 MTRF1O75570 445 aaKnown RBP11.68□□□□□ -0.54
SHMT2-234ENST00000557703 IGHV4-39P01824 125 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 FOSL1P15407 271 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 HCCSP53701 268 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 TMEM33P57088 247 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF92Q03936 586 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 SNAI3Q3KNW1 292 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 CDONQ4KMG0 1287 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 ZBTB37Q5TC79 503 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 FDX2Q6P4F2 183 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 SPATC1Q76KD6 591 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 ZNF786Q8N393 782 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 SPRYD4Q8WW59 207 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-234ENST00000557703 RDH5Q92781 318 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 SORCS2Q96PQ0 1159 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 SLC30A2Q9BRI3 323 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 RHNO1Q9BSD3 238 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 ANKRD60Q9BZ19 345 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 DECR2Q9NUI1 292 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 TMEM100Q9NV29 134 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 PTTG3PQ9NZH4 202 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 MYEF2Q9P2K5 600 aaKnown RBP11.68□□□□□ -0.54
SHMT2-234ENST00000557703 RAB26Q9ULW5 256 aa11.68□□□□□ -0.54
SHMT2-234ENST00000557703 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms