RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF584Q8IVC4 421 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 PHC2Q8IXK0 858 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 ELMOD2Q8IZ81 293 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 OR8B12Q8NGG6 310 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 OR13F1Q8NGS4 319 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 FAM222BQ8WU58 562 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 SLC7A6Q92536 515 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 GHSRQ92847 366 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 CPNE2Q96FN4 548 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-220ENST00000555634 REEP6Q96HR9 211 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 WFIKKN1Q96NZ8 548 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 C1QTNF5Q9BXJ0 243 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 EXOSC4Q9NPD3 245 aaKnown RBP9.71□□□□□ -0.86
SHMT2-220ENST00000555634 FRRS1LQ9P0K9 344 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 ST6GALNAC2Q9UJ37 374 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 GPR160Q9UJ42 338 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 NOP16Q9Y3C1 178 aaKnown RBP9.71□□□□□ -0.86
SHMT2-220ENST00000555634 LOC100509620A0A075B734 347 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ABCD4O14678 606 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 AIREO43918 545 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ICMTO60725 284 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 SMPD2O60906 423 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 GATBO75879 557 aaKnown RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ISG15P05161 165 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 CELA3BP08861 270 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ADRA2AP08913 450 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 CCL2P13500 99 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 GNALP38405 381 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 RANBP1P43487 201 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 PPP1CBP62140 327 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 PPP3R1P63098 170 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 SNTB2Q13425 540 aaKnown RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 KRTAP27-1Q3LI81 207 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ZMAT1Q5H9K5 638 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 RGS7BPQ6MZT1 257 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 OR1J1Q8NGS3 322 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 OR51E1Q8TCB6 317 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 RAB2BQ8WUD1 216 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 FAM71F1Q96KD3 344 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 PDCD1LG2Q9BQ51 273 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 BCL7BQ9BQE9 202 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 OR51B6Q9H340 312 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
SHMT2-220ENST00000555634 ANKHD1Q8IWZ3 2542 aaKnown RBP9.7□□□□□ -0.86
SHMT2-220ENST00000555634 UBR5O95071 2799 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-220ENST00000555634 LOC100506127A0A0U1RQW1 187 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 GGT3PA6NGU5 568 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 OR4C45A6NMZ5 311 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 DHRS7CA6NNS2 312 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 E9PI62 339 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 P2RY10O00398 339 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 SRSF10O75494 262 aaKnown RBP9.69□□□□□ -0.86
SHMT2-220ENST00000555634 DHRS3O75911 302 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ZFPL1O95159 310 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 TTRP02766 147 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 TFAP2AP05549 437 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 FAM157BP0CG42 384 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 KIR3DL2P43630 455 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 MAP2K3P46734 347 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ALDH3B2P48448 385 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 UCP2P55851 309 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 BSPH1Q075Z2 132 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 TFF3Q07654 80 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 MOGQ16653 247 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF718Q3SXZ3 478 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 Q499Y3 187 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 MEX3BQ6ZN04 569 aaKnown RBP9.69□□□□□ -0.86
SHMT2-220ENST00000555634 GDPGP1Q6ZNW5 385 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 RFPL4BQ6ZWI9 263 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 SATL1Q86VE3 508 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 CLVS1Q8IUQ0 354 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-220ENST00000555634 PRSS35Q8N3Z0 413 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 CSNK2A3Q8NEV1 391 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 SEMA6DQ8NFY4 1073 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 KBTBD8Q8NFY9 601 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ZNF420Q8TAQ5 688 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-220ENST00000555634 PHYHIPQ92561 330 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 TMEM203Q969S6 136 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 C10orf35Q96D05 121 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 PLPPR2Q96GM1 343 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 TECTBQ96PL2 329 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ABCB9Q9NP78 766 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 G6PC2Q9NQR9 355 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 GPR84Q9NQS5 396 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 PTTG3PQ9NZH4 202 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 NPAP1Q9NZP6 1156 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 SLC22A13Q9Y226 551 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 ATP23Q9Y6H3 246 aa9.69□□□□□ -0.86
SHMT2-220ENST00000555634 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-220ENST00000555634 LOC390937A0A1W2PQ73 354 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 PLSCR5A0PG75 271 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ANKRD30BLA7E2S9 258 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 ATP6V1G2-DDX39BF2Z307 99 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 MAGEB3O15480 346 aa9.68□□□□□ -0.86
SHMT2-220ENST00000555634 PNPP00491 289 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms