RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PRR32B1ATL7 298 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 PRODHO43272 600 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 PMELP40967 661 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 OPRL1P41146 370 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 ESRRGP62508 458 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 HOXA4Q00056 320 aaPredicted RBP11.54□□□□□ -0.56
SNX6-203ENST00000555416 TAF13Q15543 124 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 SLX4IPQ5VYV7 408 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 C12orf73Q69YU5 71 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 LINC01356Q8N9X3 169 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 OTOSQ8NHW6 89 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 CENPNQ96H22 339 aaPredicted RBP11.54□□□□□ -0.56
SNX6-203ENST00000555416 PLEKHA8Q96JA3 519 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 MEGF10Q96KG7 1140 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
SNX6-203ENST00000555416 SIGLEC11Q96RL6 698 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 TMEM106BQ9NUM4 274 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 DNAJC27Q9NZQ0 273 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 FBN1P35555 2871 aaKnown RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 CD300LBA8K4G0 201 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 MRPL3P09001 348 aaKnown RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 FCGR1AP12314 374 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 CX3CR1P49238 355 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 RPS7P62081 194 aaKnown RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 MALLQ13021 153 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 PGAP1Q75T13 922 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 SHFQ7M4L6 423 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 MRPL21Q7Z2W9 205 aaKnown RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 RFLNBQ8N5W9 214 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 TCEANCQ8N8B7 351 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 OR13G1Q8NGZ3 307 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 THEM6Q8WUY1 208 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 DVL3Q92997 716 aaPredicted RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 TEAD3Q99594 435 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
SNX6-203ENST00000555416 PPP1R3EQ9H7J1 279 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 ZNF665Q9H7R5 613 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
SNX6-203ENST00000555416 MXRA5Q9NR99 2828 aa11.52□□□□□ -0.56
SNX6-203ENST00000555416 ARHGAP32A7KAX9 2087 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 PSMD9O00233 223 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 EBAG9O00559 213 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 ZNF205O95201 554 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 IGHV2-70P01814 119 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 ALOX5APP20292 161 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 CA6P23280 308 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 TNFSF4P23510 183 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 MMP16P51512 607 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 ZNF121P58317 390 aaPredicted RBP11.52□□□□□ -0.57
SNX6-203ENST00000555416 GRB2P62993 217 aaKnown RBP11.52□□□□□ -0.57
SNX6-203ENST00000555416 MAB21L1Q13394 359 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 CR1LQ2VPA4 569 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 CHRFAM7AQ494W8 412 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 SLC35D3Q5M8T2 416 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 AADACL4Q5VUY2 407 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 FAM57BQ71RH2 274 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 SGK3Q96BR1 496 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 OSBPL10Q9BXB5 764 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 BRD7Q9NPI1 651 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 TMEM100Q9NV29 134 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 COPS3Q9UNS2 423 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.57
SNX6-203ENST00000555416 B4DSR2 109 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 TBX1O43435 398 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
SNX6-203ENST00000555416 ANXA2P07355 339 aaKnown RBP11.51□□□□□ -0.57
SNX6-203ENST00000555416 LYNP07948 512 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 H2BFMP0C1H6 154 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 SBK2P0C263 348 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 SLC15A1P46059 708 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 ZMYND11Q15326 602 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 PRAMEF6Q5VXH4 476 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 SLC16A9Q7RTY1 509 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 OR56B2PQ8NGI1 322 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 TMEM163Q8TC26 289 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 SPRYD4Q8WW59 207 aaPredicted RBP11.51□□□□□ -0.57
SNX6-203ENST00000555416 RAB1CQ92928 201 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 TTTY10Q9BZA0 68 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
SNX6-203ENST00000555416 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 NPTNQ9Y639 398 aa11.51□□□□□ -0.57
SNX6-203ENST00000555416 ISPDA4D126 451 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 GGT3PA6NGU5 568 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 MAGEB4O15481 346 aaPredicted RBP11.5□□□□□ -0.57
SNX6-203ENST00000555416 PLPP2O43688 288 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 MSMBP08118 114 aa11.5□□□□□ -0.57
SNX6-203ENST00000555416 TNFRSF1AP19438 455 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms