RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MYOZ1Q9NP98 299 aaPredicted RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 MYOZ2Q9NPC6 264 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 COL16A1Q07092 1604 aaPredicted RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 GAKO14976 1311 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 MROH7Q68CQ1 1323 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 NEURL4Q96JN8 1562 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 A6NDN8 102 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 ZBTB5O15062 677 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 POLR1CO15160 346 aaPredicted RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 SNAI2O43623 268 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 TDP2O95551 362 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 HOXC4P09017 264 aaPredicted RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 MAGP20916 626 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 USF1P22415 310 aaPredicted RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 RBM34P42696 430 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 PPOXP50336 477 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 YWHAEP62258 255 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 TPM4P67936 248 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 PTGES3Q15185 160 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 RPEL1Q2QD12 228 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 TCEAL5Q5H9L2 206 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 FAM78AQ5JUQ0 283 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 PRMT9Q6P2P2 845 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 LINC00523Q86TU6 105 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 UNC93AQ86WB7 457 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 ERO1BQ86YB8 467 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 CD302Q8IX05 232 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 TRAM1L1Q8N609 369 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 CLHC1Q8NHS4 586 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 ITFG1Q8TB96 612 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 LRRC20Q8TCA0 184 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 TCEAL3Q969E4 200 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 FAM104AQ969W3 186 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 DCPSQ96C86 337 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 ARL5BQ96KC2 179 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 RNF145Q96MT1 663 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 CATSPER2Q96P56 530 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 KCNS3Q9BQ31 491 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 UQCC2Q9BRT2 126 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 LLPHQ9BRT6 129 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 PARVGQ9HBI0 331 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
VRK1-205ENST00000555402 RAB26Q9ULW5 256 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 HYOU1Q9Y4L1 999 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 UNC13AQ9UPW8 1703 aa3.39□□□□□ -1.87
VRK1-205ENST00000555402 IGLV1-50A0A075B6I6 118 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 MAGEB4O15481 346 aaPredicted RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 MPDU1O75352 247 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 RP2O75695 350 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 IGHV1-8P0DP01 117 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 ZNF3P17036 446 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 PMCHP20382 165 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 SLAQ13239 276 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 TFDP2Q14188 446 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 MLIPQ5VWP3 458 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 SLC25A25Q6KCM7 469 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 MRPL21Q7Z2W9 205 aaKnown RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 SNX20Q7Z614 316 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 NKAIN4Q8IVV8 208 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 ARRDC1Q8N5I2 433 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 COQ8AQ8NI60 647 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 RGP1Q92546 391 aaPredicted RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 NAT6Q93015 286 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 TOP1MTQ969P6 601 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 CIDECQ96AQ7 238 aaPredicted RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 ZBED3Q96IU2 234 aaPredicted RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 FAM210AQ96ND0 272 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 ZNF382Q96SR6 550 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 NAA50Q9GZZ1 169 aaKnown RBP3.38□□□□□ -1.87
VRK1-205ENST00000555402 DEFB129Q9H1M3 183 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 MED4Q9NPJ6 270 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 PSG11Q9UQ72 335 aa3.38□□□□□ -1.87
VRK1-205ENST00000555402 TRAV19A0A0A6YYK7 116 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 A0A1B0GUH1 482 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 SEMA3DO95025 777 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 SNAI1O95863 264 aaPredicted RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 TPM3P06753 285 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 RAB5AP20339 215 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 MYL9P24844 172 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 GABRR2P28476 465 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 HTR2BP41595 481 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 GPR4P46093 362 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 FABP6P51161 128 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 LCN2P80188 198 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 KIR2DS1Q14954 304 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 STK38Q15208 465 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 ANGPT1Q15389 498 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 HSP90AA4PQ58FG1 418 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 RWDD4Q6NW29 188 aaKnown RBP3.37□□□□□ -1.87
VRK1-205ENST00000555402 H3F3CQ6NXT2 135 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 ULK3Q6PHR2 472 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 CALHM1Q8IU99 346 aa3.37□□□□□ -1.87
VRK1-205ENST00000555402 RIMKLAQ8IXN7 391 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms