RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SNAI3Q3KNW1 292 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 C12orf73Q69YU5 71 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 KCTD18Q6PI47 426 aaPredicted RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 RHOUQ7L0Q8 258 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 KRT77Q7Z794 578 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 NAA40Q86UY6 237 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 OR10AD1Q8NGE0 317 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 HPS1Q92902 700 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 RAB1CQ92928 201 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 PGAM5Q96HS1 289 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 OR2V2Q96R30 315 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 TEAD3Q99594 435 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 C9orf16Q9BUW7 83 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 OR10A2Q9H208 303 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 TMEFF2Q9UIK5 374 aaPredicted RBP10.28□□□□□ -0.76
SRP54-206ENST00000555317 DYSFO75923 2080 aa10.28□□□□□ -0.76
SRP54-206ENST00000555317 TANC2Q9HCD6 1990 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 LOC100289279A0A1B0GTE1 492 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 ISPDA4D126 451 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 A8MV72 311 aaPredicted RBP10.27□□□□□ -0.77
SRP54-206ENST00000555317 INAFM1C9JVW0 142 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 RP2O75695 350 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 TACSTD2P09758 323 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 CFL1P23528 166 aaKnown RBP10.27□□□□□ -0.77
SRP54-206ENST00000555317 OPRL1P41146 370 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 MVKQ03426 396 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 KRTAP1-1Q07627 177 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 GLYATL3Q5SZD4 288 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 C6orf52Q5T4I8 152 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 NXNL2Q5VZ03 156 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 FAM166AQ6J272 317 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 Q6ZR03 302 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 FAM57BQ71RH2 274 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 MEPCEQ7L2J0 689 aaKnown RBP10.27□□□□□ -0.77
SRP54-206ENST00000555317 CBR4Q8N4T8 237 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 OR2AE1Q8NHA4 323 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 ITLN1Q8WWA0 313 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 ASB17Q8WXJ9 295 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 EME1Q96AY2 570 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 MROQ9BYG7 248 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 NIPAL2Q9H841 368 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 TREM2Q9NZC2 230 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 IL19Q9UHD0 177 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 KCNS2Q9ULS6 477 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 PPP1R3CQ9UQK1 317 aa10.27□□□□□ -0.77
SRP54-206ENST00000555317 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 CCDC182A6NF36 153 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 LRRC30A6NM36 301 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 CD300LBA8K4G0 201 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 IFNL4K9M1U5 179 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 PHYHO14832 338 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 LILRA1O75019 489 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 ALPLP05186 524 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 ATP6V1E1P36543 226 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 CDH15P55291 814 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 PRSS12P56730 875 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 ZNF121P58317 390 aaPredicted RBP10.26□□□□□ -0.77
SRP54-206ENST00000555317 ZNF92Q03936 586 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 POU4F2Q12837 409 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 OR8G1Q15617 311 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 AVPI1Q5T686 147 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 LRRN1Q6UXK5 716 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 ZBTB49Q6ZSB9 765 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 PQLC1Q8N2U9 271 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 OR8J1Q8NGP2 316 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 FAM81AQ8TBF8 368 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 RFKQ969G6 155 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 REEP6Q96HR9 211 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 AMELYQ99218 206 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 MNTQ99583 582 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 SLC30A2Q9BRI3 323 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 USE1Q9NZ43 259 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 WARS2Q9UGM6 360 aaKnown RBP10.26□□□□□ -0.77
SRP54-206ENST00000555317 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 CACNG2Q9Y698 323 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
SRP54-206ENST00000555317 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 ANKRD30BLA7E2S9 258 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 ZNF670-ZNF695F2Z2N8 137 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 TGFAP01135 160 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 IRF2P14316 349 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 ALOX5APP20292 161 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 POLR2IP36954 125 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 PSMA6P60900 246 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 SNCBQ16143 134 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 ZSCAN26Q16670 478 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 ZNF829Q3KNS6 432 aaPredicted RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 ZIK1Q3SY52 487 aaPredicted RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 BCDIN3DQ7Z5W3 292 aaKnown RBP10.25□□□□□ -0.77
SRP54-206ENST00000555317 COMMD2Q86X83 199 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 SLC35F2Q8IXU6 374 aa10.25□□□□□ -0.77
SRP54-206ENST00000555317 FTMTQ8N4E7 242 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms