RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CCL2P13500 99 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 HSD17B1P14061 328 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF32P17041 273 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 USF1P22415 310 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 CDAP32320 146 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 IFNA8P32881 189 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 WNT5AP41221 380 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GPR4P46093 362 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 OMPP47874 163 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SLC9A3P48764 834 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 EVX1P49640 407 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 FXYD6P3P58550 94 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RPL27P61353 136 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ERVS71-1P61550 626 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RPS23P62266 143 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 LCN6P62502 163 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GNGT1P63211 74 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 MRPS34P82930 218 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 PPP2R2BQ00005 443 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 CD47Q08722 323 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 DGCR6Q14129 220 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ENDOGQ14249 297 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 MAD2L1BPQ15013 274 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TAF11Q15544 211 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ANKDD1AQ495B1 522 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SLC36A2Q495M3 483 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 MESTQ5EB52 335 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM255AQ5JRV8 349 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ELFN2Q5R3F8 820 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 FAM205BPQ63HN1 556 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GLYATQ6IB77 296 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM53Q6P2H8 277 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 PODNL1Q6PEZ8 512 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TBPL2Q6SJ96 375 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF730Q6ZMV8 503 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TMPRSS11FQ6ZWK6 438 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SLC16A14Q7RTX9 510 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 HDDC2Q7Z4H3 204 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 PIGWQ7Z7B1 504 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 DPPA2Q7Z7J5 298 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 LRP11Q86VZ4 500 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RNF113BQ8IZP6 322 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 PGAM4Q8N0Y7 254 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ZCCHC24Q8N2G6 241 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RNF148Q8N7C7 305 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SLC30A7Q8NEW0 376 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 OR51A7Q8NH64 312 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 SLC7A13Q8TCU3 470 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 NSMAFQ92636 917 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 BPIFA2Q96DR5 249 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 C7orf34Q96L11 122 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TNFRSF13CQ96RJ3 184 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GPX7Q96SL4 187 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 GPA33Q99795 319 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 BPESC1Q9GZL8 116 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RAB1BQ9H0U4 201 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TPK1Q9H3S4 243 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 MAP6D1Q9H9H5 199 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 NMNAT1Q9HAN9 279 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 DYNLRB1Q9NP97 96 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 MYOZ1Q9NP98 299 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 YAE1D1Q9NRH1 226 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 DCAF13Q9NV06 445 aaKnown RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 CD300AQ9UGN4 299 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TAGLN3Q9UI15 199 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 RPS6KA6Q9UK32 745 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 FBXO9Q9UK97 447 aaPredicted RBP3.53□□□□□ -1.84
VTI1B-203ENST00000554636 FZR1Q9UM11 496 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 ADAM18Q9Y3Q7 739 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 V9GYQ6 96 aa3.53□□□□□ -1.84
VTI1B-203ENST00000554636 TANC2Q9HCD6 1990 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 IGLV3-9A0A075B6K5 115 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 LOC100509620A0A075B734 347 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 A0A1W2PPW3 197 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 LOC390937A0A1W2PQ73 354 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SH3PXD2BA1X283 911 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 A6NIZ1 184 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 A8MV72 311 aaPredicted RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 M0R233 179 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 IMPA2O14732 288 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ARPC2O15144 300 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 SYNGR3O43761 229 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 PTP4A3O75365 173 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 FARS2O95363 451 aaKnown RBP3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TXNDC12O95881 172 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CLPTM1O96005 669 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ADRA2AP08913 450 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CST2P09228 141 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 TACSTD2P09758 323 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 NR2C1P13056 603 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 DAOP14920 347 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF250P15622 560 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 CTLA4P16410 223 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF23P17027 643 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 ATP6V1B2P21281 511 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 MSR1P21757 451 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 IGFBP5P24593 272 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 GIFP27352 417 aa3.52□□□□□ -1.85
VTI1B-203ENST00000554636 LAP3P28838 519 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms