RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MRPL21Q7Z2W9 205 aaKnown RBP20.04■□□□□ 0.8
FOXA1-204ENST00000554607 LDLRAD3Q86YD5 345 aa20.04■□□□□ 0.8
FOXA1-204ENST00000554607 SCCPDHQ8NBX0 429 aa20.04■□□□□ 0.8
FOXA1-204ENST00000554607 SIRPDQ9H106 197 aa20.04■□□□□ 0.8
FOXA1-204ENST00000554607 SRA1Q9HD15 236 aaKnown RBP20.04■□□□□ 0.8
FOXA1-204ENST00000554607 FAM32AQ9Y421 112 aaKnown RBP20.04■□□□□ 0.8
FOXA1-204ENST00000554607 IGLV1-36A0A0B4J1U3 117 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 C3orf80F5H4A9 247 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 DCTN6O00399 190 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 PPP1R3DO95685 299 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 PTBP3O95758 552 aaKnown RBP20.03■□□□□ 0.8
FOXA1-204ENST00000554607 ECDO95905 644 aaPredicted RBP20.03■□□□□ 0.8
FOXA1-204ENST00000554607 IGHV4-59P01825 116 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 CA6P23280 308 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 OMPP47874 163 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 TPTEP56180 551 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 LIPEQ05469 1076 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 TRAP1Q12931 704 aaKnown RBP20.03■□□□□ 0.8
FOXA1-204ENST00000554607 SLC18B1Q6NT16 456 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 CFAP77Q6ZQR2 320 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 BOLLQ8N9W6 283 aaKnown RBP20.03■□□□□ 0.8
FOXA1-204ENST00000554607 SLC26A10Q8NG04 563 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 LRTOMTQ8WZ04 291 aa20.03■□□□□ 0.8
FOXA1-204ENST00000554607 OOEPA6NGQ2 149 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 UNC119BA6NIH7 251 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 RENP00797 406 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 SERPINA1P01009 418 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 SMARCD3Q6STE5 483 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 NAA40Q86UY6 237 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 SLC15A3Q8IY34 581 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 OR6V1Q8N148 313 aa20.02■□□□□ 0.8
FOXA1-204ENST00000554607 ZSCAN4Q8NAM6 433 aaPredicted RBP20.02■□□□□ 0.8
FOXA1-204ENST00000554607 ERMAPQ96PL5 475 aaPredicted RBP20.02■□□□□ 0.8
FOXA1-204ENST00000554607 A0A0U1RQK1 487 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 CD300LBA8K4G0 201 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 GGT2P36268 569 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 FXYD6P3P58550 94 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 ARF6P62330 175 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 FGD3Q5JSP0 725 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 TSEN54Q7Z6J9 526 aaKnown RBP20.01■□□□□ 0.79
FOXA1-204ENST00000554607 LINC00346Q8IVM7 164 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 SPERTQ8NA61 448 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 RCN3Q96D15 328 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 ADAT1Q9BUB4 502 aaKnown RBP20.01■□□□□ 0.79
FOXA1-204ENST00000554607 SMURF1Q9HCE7 757 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 FAM96BQ9Y3D0 163 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 CAPN7Q9Y6W3 813 aa20.01■□□□□ 0.79
FOXA1-204ENST00000554607 MZT1Q08AG7 82 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 BTN2A1Q7KYR7 527 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 SPTSSAQ969W0 71 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 RASSF4Q9H2L5 321 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 C16orf95Q9H693 158 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 CNTD2Q9H8S5 307 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 GMPR2Q9P2T1 348 aaKnown RBP20■□□□□ 0.79
FOXA1-204ENST00000554607 CYB5R1Q9UHQ9 305 aa20■□□□□ 0.79
FOXA1-204ENST00000554607 CAB39Q9Y376 341 aaPredicted RBP20■□□□□ 0.79
FOXA1-204ENST00000554607 GGT3PA6NGU5 568 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 SLC22A2O15244 555 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 HLA-DQA2P01906 255 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 RHCEP18577 417 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 HOXA4Q00056 320 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-204ENST00000554607 C2orf68Q2NKX9 166 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 ZBTB46Q86UZ6 589 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 FAM162AQ96A26 154 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 NMNAT3Q96T66 252 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 PNRC2Q9NPJ4 139 aaKnown RBP19.99■□□□□ 0.79
FOXA1-204ENST00000554607 C1orf123Q9NWV4 160 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 MRPL15Q9P015 296 aaKnown RBP19.99■□□□□ 0.79
FOXA1-204ENST00000554607 KPTNQ9Y664 436 aa19.99■□□□□ 0.79
FOXA1-204ENST00000554607 M0R135 149 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 DVL1O14640 695 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 ARPC3O15145 178 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 TSPAN15O95858 294 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 GYPAP02724 150 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 SLC6A6P31641 620 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 RFX4Q33E94 735 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 CDONQ4KMG0 1287 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 Q6ZSV7 163 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 NPRL2Q8WTW4 380 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 ZNF799Q96GE5 643 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 HOPXQ9BPY8 73 aaPredicted RBP19.98■□□□□ 0.79
FOXA1-204ENST00000554607 RPRD1BQ9NQG5 326 aaKnown RBP19.98■□□□□ 0.79
FOXA1-204ENST00000554607 KAAG1Q9UBP8 84 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 KCNG2Q9UJ96 466 aa19.98■□□□□ 0.79
FOXA1-204ENST00000554607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-204ENST00000554607 A0A1B0GVI7 797 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 BTBD17A6NE02 478 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 OR10H3O60404 316 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 DHRS7BQ6IAN0 325 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-204ENST00000554607 C1QL4Q86Z23 238 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 RP9Q8TA86 221 aaKnown RBP19.97■□□□□ 0.79
FOXA1-204ENST00000554607 FAM110DQ8TAY7 271 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-204ENST00000554607 FANK1Q8TC84 345 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 DMRTB1Q96MA1 342 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 C14orf119Q9NWQ9 140 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 NDUFAF4Q9P032 175 aa19.97■□□□□ 0.79
FOXA1-204ENST00000554607 RPUSD1Q9UJJ7 312 aaKnown RBP19.97■□□□□ 0.79
FOXA1-204ENST00000554607 TRBV4-1A0A0J9YWV2 114 aa19.96■□□□□ 0.79
FOXA1-204ENST00000554607 C5orf63A6NC05 138 aa19.96■□□□□ 0.79
FOXA1-204ENST00000554607 A6NLC8 198 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms