RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF786Q8N393 782 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 BPIFB6Q8NFQ5 453 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 OR4F15Q8NGB8 312 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 OR1K1Q8NGR3 316 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 OR6K6Q8NGW6 343 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 LILRB4Q8NHJ6 448 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SMAP2Q8WU79 429 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 GGHQ92820 318 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 BCL2L2Q92843 193 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 LGALS12Q96DT0 336 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 RNFT2Q96EX2 444 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 INTS14Q96SY0 518 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SH3GL3Q99963 347 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 WDR76Q9H967 626 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ADGRL4Q9HBW9 690 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 POLE4Q9NR33 117 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 PAK1IP1Q9NWT1 392 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 TAS2R16Q9NYV7 291 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 PSORS1C1Q9UIG5 152 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ERRFI1Q9UJM3 462 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 EXOGQ9Y2C4 368 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 RPL36Q9Y3U8 105 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 COMMD3-BMI1R4GMX3 469 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 HEATR1Q9H583 2144 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SPTAN1Q13813 2472 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 DOPEY1Q5JWR5 2465 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 EFCAB10A6NFE3 127 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 TRIM64A6NGJ6 449 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF593O00488 134 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZG16O60844 167 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 HLA-DQA2P01906 255 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 MRPL3P09001 348 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SBK2P0C263 348 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 PATE4P0C8F1 98 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 PIPP12273 146 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 NPR2P20594 1047 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 PSMB1P20618 241 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 MSR1P21757 451 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 CCKARP32238 428 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 RPS27P42677 84 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ENTPD1P49961 510 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 BLVRAP53004 296 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 HCCSP53701 268 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SH3BGRP55822 239 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 LSM6P62312 80 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SLC35A2P78381 396 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM27E3Q08E93 113 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 P2RY6Q15077 328 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 GABRA6Q16445 453 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SLC25A35Q3KQZ1 300 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FBXL19-AS1Q494R0 122 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 TEX30Q5JUR7 227 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 LCN1P1Q5VSP4 162 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FAM27BQ5VT28 67 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 MTFR2Q6P444 385 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 AHSA2Q719I0 299 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SLC16A9Q7RTY1 509 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ERI1Q8IV48 349 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SKA3Q8IX90 412 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SLC22A24Q8N4F4 322 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 RFLNBQ8N5W9 214 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 OR51G2Q8NGK0 314 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 OR52I1Q8NGK6 324 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 OR6N2Q8NGY6 317 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FGFBP3Q8TAT2 258 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ITLN2Q8WWU7 325 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ASB5Q8WWX0 329 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FBXO17Q96EF6 278 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SIGLEC11Q96RL6 698 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 CNN2Q99439 309 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF649Q9BS31 505 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF416Q9BWM5 594 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 YTHDF1Q9BYJ9 559 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 YIPF3Q9GZM5 350 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 DUSP21Q9H596 190 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 SIAEQ9HAT2 523 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 FGF20Q9NP95 211 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF224Q9NZL3 707 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 CNOT2Q9NZN8 540 aaKnown RBP5.46□□□□□ -1.54
SCFD1-212ENST00000554486 KCNG2Q9UJ96 466 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 COPS3Q9UNS2 423 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 KLHDC2Q9Y2U9 406 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 LHFPL6Q9Y693 200 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 LRRK2Q5S007 2527 aa5.46□□□□□ -1.54
SCFD1-212ENST00000554486 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 ANKHD1Q8IWZ3 2542 aaKnown RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 A0A1W2PQL4 384 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-212ENST00000554486 CIB4A0PJX0 185 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 NKX2-6A6NCS4 301 aa5.45□□□□□ -1.54
SCFD1-212ENST00000554486 SNTNA6NMZ2 147 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms