RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CDKN3Q16667 212 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TMEM241Q24JQ0 296 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CFAP52Q8N1V2 620 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CXorf40AQ8TE69 158 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 C2orf15Q8WU43 125 aaKnown RBP8.54□□□□□ -1.04
SIX4-202ENST00000554079 TVP23CQ96ET8 276 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TP53RKQ96S44 253 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CD180Q99467 661 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 MCHR1Q99705 422 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PRSS27Q9BQR3 290 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ANGPTL4Q9BY76 406 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TPSD1Q9BZJ3 242 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 SLC26A1Q9H2B4 701 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 STRAPQ9Y3F4 350 aaKnown RBP8.54□□□□□ -1.04
SIX4-202ENST00000554079 XKRY2A2RUG3 117 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 MEIS3P2A8K0S8 358 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 IFNL4K9M1U5 179 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 XKRYO14609 159 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 DNAJB6O75190 326 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TOMM40O96008 361 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 MAS1P04201 325 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PET100P0DJ07 73 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 AKR1C4P17516 323 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 MDKP21741 143 aaPredicted RBP8.54□□□□□ -1.04
SIX4-202ENST00000554079 SOX2P48431 317 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 P2RY6Q15077 328 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CCSMST1Q4G0I0 132 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ALG10BQ5I7T1 473 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PLEKHS1Q5SXH7 462 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 OR4C11Q6IEV9 310 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ZNF429Q86V71 674 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 OR52E1Q8NGJ3 308 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PFN4Q8NHR9 129 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TNFRSF14Q92956 283 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 MS4A6EQ96DS6 147 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 WDR34Q96EX3 536 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 OR10C1Q96KK4 312 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 GPR35Q9HC97 309 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 C5AR2Q9P296 337 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 LHX3Q9UBR4 397 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 NAGKQ9UJ70 344 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CDV3Q9UKY7 258 aaKnown RBP8.54□□□□□ -1.04
SIX4-202ENST00000554079 RNF150Q9ULK6 438 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 SLC7A7Q9UM01 511 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 SIGLEC7Q9Y286 467 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 IGLV3-16A0A075B6K0 115 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 LOC100289279A0A1B0GTE1 492 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 C1QL1O75973 258 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 OR2J2O76002 312 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 RCBTB2O95199 551 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 CLDN7O95471 211 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 CD160O95971 181 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 GIMD1P0DJR0 217 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 AKR1A1P14550 325 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 ZNF708P17019 499 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 IMPA1P29218 277 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 OR10J1P30954 320 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 FCGR2CP31995 323 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 PBX2P40425 430 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 MMP16P51512 607 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 SGSHP51688 502 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 ADAM8P78325 824 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 PMS2P11Q13670 270 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 BATFQ16520 125 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 C2orf76Q3KRA6 126 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 MORN1Q5T089 497 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 ZNF684Q5T5D7 378 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 FAM166AQ6J272 317 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 MAML2Q8IZL2 1156 aaPredicted RBP8.53□□□□□ -1.04
SIX4-202ENST00000554079 KDM8Q8N371 416 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 OR2AP1Q8NGE2 309 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 OR13C9Q8NGT0 318 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 STT3BQ8TCJ2 826 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 RNF128Q8TEB7 428 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 CCDC74AQ96AQ1 378 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 NUDT11Q96G61 164 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 IGSF21Q96ID5 467 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 C2orf50Q96LR7 162 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 PRAP1Q96NZ9 151 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 HIST1H2AAQ96QV6 131 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 C20orf141Q9NUB4 165 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 SLC25A13Q9UJS0 675 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 MRPS2Q9Y399 296 aaKnown RBP8.53□□□□□ -1.04
SIX4-202ENST00000554079 DYRK1BQ9Y463 629 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 TNFSF13O75888 250 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 TBX18O95935 607 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 CHRM2P08172 466 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 RPL12P30050 165 aaKnown RBP8.53□□□□□ -1.04
SIX4-202ENST00000554079 APOBEC1P41238 236 aaKnown RBP8.53□□□□□ -1.04
SIX4-202ENST00000554079 OR3A2P47893 321 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 TAS2R31P59538 309 aa8.53□□□□□ -1.04
SIX4-202ENST00000554079 DCAF7P61962 342 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms