RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 UPRTQ96BW1 309 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 NEIL1Q96FI4 390 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CENPNQ96H22 339 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PLEKHA8Q96JA3 519 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 TSSK2Q96PF2 358 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 DDOQ99489 341 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PITX2Q99697 317 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 IFT27Q9BW83 186 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CDADC1Q9BWV3 514 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 SSBP3Q9BWW4 388 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PLA2G12AQ9BZM1 189 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 SLC22A4Q9H015 551 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM165Q9HC07 324 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PNRC2Q9NPJ4 139 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ESM1Q9NQ30 184 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 RPRD1BQ9NQG5 326 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 C8orf4Q9NR00 106 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM100Q9NV29 134 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ENOPH1Q9UHY7 261 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 SAMHD1Q9Y3Z3 626 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 V9GYQ6 96 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 IGHV2-70DA0A0C4DH43 119 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 F5H5P2 479 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PHYHO14832 338 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 WIPF1O43516 503 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 RRP9O43818 475 aaKnown RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 E2F6O75461 281 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 RGS9O75916 674 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 GPANK1O95872 356 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PLATP00750 562 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 HKR1P10072 659 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PRTN3P24158 256 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 NOS3P29474 1203 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 CD80P33681 288 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 CD200P41217 278 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 CENPAP49450 140 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 NPY4RP50391 375 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 RAD23AP54725 363 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 TPTEP56180 551 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 BPIFB3P59826 476 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 GNB2P62879 340 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 MALLQ13021 153 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 MAB21L1Q13394 359 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 GK2Q14410 553 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 KPNB1Q14974 876 aaKnown RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PCK2Q16822 640 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 C11orf91Q3C1V1 193 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 AWAT1Q58HT5 328 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 KLF17Q5JT82 389 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 OTPQ5XKR4 325 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF770Q6IQ21 691 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PGBD2Q6P3X8 592 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 CORO6Q6QEF8 472 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 BTNL3Q6UXE8 466 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 MOGAT3Q86VF5 341 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 KLBQ86Z14 1044 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 ZDHHC13Q8IUH4 622 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 LINC00346Q8IVM7 164 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 SIGLECL1Q8N7X8 197 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 OR10AD1Q8NGE0 317 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 OR52L1Q8NGH7 329 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 OR2T4Q8NH00 348 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 OR5K1Q8NHB7 308 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF420Q8TAQ5 688 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 GIPC3Q8TF64 312 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 RAB40AQ8WXH6 277 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 STMN2Q93045 179 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 SLCO4A1Q96BD0 722 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM246Q9BRR3 403 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 TEX12Q9BXU0 123 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF556Q9HAH1 456 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 SRA1Q9HD15 236 aaKnown RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 MRPL22Q9NWU5 206 aaKnown RBP5.53□□□□□ -1.52
SLIRP-203ENST00000554074 IL20Q9NYY1 176 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF69Q9UC07 566 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 BAIAP2Q9UQB8 552 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 PPIAL4AQ9Y536 164 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
SLIRP-203ENST00000554074 KIR2DS1A0A191URI9 304 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 DNAJC9-AS1A6NH13 148 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 CD300LBA8K4G0 201 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 F5H5K5 113 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 H0YL77 283 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 M0R135 149 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 BHLHE40O14503 412 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 SPRY1O43609 319 aaPredicted RBP5.52□□□□□ -1.53
SLIRP-203ENST00000554074 GMDSO60547 372 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 CYB5R3P00387 301 aaPredicted RBP5.52□□□□□ -1.53
SLIRP-203ENST00000554074 HLA-DQA2P01906 255 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 LCATP04180 440 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
SLIRP-203ENST00000554074 IRF2P14316 349 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 ZNF823P16415 610 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 EGR1P18146 543 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 PSMB10P40306 273 aa5.52□□□□□ -1.53
SLIRP-203ENST00000554074 PMELP40967 661 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms