RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZNF454Q8N9F8 522 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 OR13G1Q8NGZ3 307 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 ITLN1Q8WWA0 313 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 OR2V2Q96R30 315 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 OSBPL10Q9BXB5 764 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 GABARAPL3Q9BY60 117 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 TMEM160Q9NX00 188 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 DCAF16Q9NXF7 216 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 H0YL77 283 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 HSD11B1P28845 292 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 CDH15P55291 814 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 LMO4P61968 165 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 KRTAP21-3Q3LHN1 58 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 LCN1P1Q5VSP4 162 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 PRSS45Q7RTY3 260 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 BCDIN3DQ7Z5W3 292 aaKnown RBP17.22■□□□□ 0.35
FOXA1-203ENST00000553751 TMEM163Q8TC26 289 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 TEAD3Q99594 435 aa17.22■□□□□ 0.35
FOXA1-203ENST00000553751 REPIN1Q9BWE0 567 aaKnown RBP17.22■□□□□ 0.35
FOXA1-203ENST00000553751 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.22■□□□□ 0.35
FOXA1-203ENST00000553751 LMX1BO60663 402 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 TGFAP01135 160 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 POLR2IP36954 125 aaKnown RBP17.21■□□□□ 0.35
FOXA1-203ENST00000553751 RBMXP38159 391 aaKnown RBP17.21■□□□□ 0.35
FOXA1-203ENST00000553751 SLC3A1Q07837 685 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 AADACL4Q5VUY2 407 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 SLC16A9Q7RTY1 509 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 TCEANCQ8N8B7 351 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 LINC01356Q8N9X3 169 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 RAB1CQ92928 201 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 SPSB4Q96A44 273 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 TIMD4Q96H15 378 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 MEGF10Q96KG7 1140 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 RBM4BQ9BQ04 359 aaKnown RBP17.21■□□□□ 0.35
FOXA1-203ENST00000553751 TMEM106BQ9NUM4 274 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 TMEM100Q9NV29 134 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 DNAJC27Q9NZQ0 273 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 KCNS2Q9ULS6 477 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 N6AMT1Q9Y5N5 214 aa17.21■□□□□ 0.35
FOXA1-203ENST00000553751 CD300LBA8K4G0 201 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 FAM157AC9JC47 383 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 F5H5P2 479 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 XRCC2O43543 280 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 APOC1P02654 83 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 HLA-DPB1P04440 258 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 ALPLP05186 524 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 ANXA2P07355 339 aaKnown RBP17.2■□□□□ 0.34
FOXA1-203ENST00000553751 MRPL3P09001 348 aaKnown RBP17.2■□□□□ 0.34
FOXA1-203ENST00000553751 H2BFMP0C1H6 154 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 ALOX5APP20292 161 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 MMP16P51512 607 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 ZNF121P58317 390 aaPredicted RBP17.2■□□□□ 0.34
FOXA1-203ENST00000553751 NXNL2Q5VZ03 156 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 THEM6Q8WUY1 208 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 SPRYD4Q8WW59 207 aaPredicted RBP17.2■□□□□ 0.34
FOXA1-203ENST00000553751 RAB3IPQ96QF0 476 aaPredicted RBP17.2■□□□□ 0.34
FOXA1-203ENST00000553751 YIPF3Q9GZM5 350 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 RIBC2Q9H4K1 309 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 OPA3Q9H6K4 179 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 GCM1Q9NP62 436 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 PPP1R3CQ9UQK1 317 aa17.2■□□□□ 0.34
FOXA1-203ENST00000553751 DYSFO75923 2080 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 TBX1O43435 398 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
FOXA1-203ENST00000553751 HCCSP53701 268 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 LRRN1Q6UXK5 716 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 FAM57BQ71RH2 274 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 MEPCEQ7L2J0 689 aaKnown RBP17.19■□□□□ 0.34
FOXA1-203ENST00000553751 PRIMA1Q86XR5 153 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 SIGLEC11Q96RL6 698 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 IL4I1Q96RQ9 567 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 ZNF665Q9H7R5 613 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 USE1Q9NZ43 259 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 LAMP5Q9UJQ1 280 aa17.19■□□□□ 0.34
FOXA1-203ENST00000553751 GGT3PA6NGU5 568 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 B4DSR2 109 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 EI24O14681 340 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 IGHV2-70P01814 119 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 CHRFAM7AQ494W8 412 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 C10orf67Q8IYJ2 551 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 OR56B2PQ8NGI1 322 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 OR52H1Q8NGJ2 320 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 CNN2Q99439 309 aaKnown RBP17.18■□□□□ 0.34
FOXA1-203ENST00000553751 SP140LQ9H930 580 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 ZNF319Q9P2F9 582 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 CDC42EP3Q9UKI2 254 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 LRP12Q9Y561 859 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 NPTNQ9Y639 398 aa17.18■□□□□ 0.34
FOXA1-203ENST00000553751 IGHV3-64DA0A0J9YX35 117 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 SLC22A31A6NKX4 558 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 PRR32B1ATL7 298 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 IGHV2-5P01817 119 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 CA6P23280 308 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 PSMA6P60900 246 aaKnown RBP17.17■□□□□ 0.34
FOXA1-203ENST00000553751 MAB21L1Q13394 359 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 PEG10Q86TG7 708 aaKnown RBP17.17■□□□□ 0.34
FOXA1-203ENST00000553751 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.17■□□□□ 0.34
FOXA1-203ENST00000553751 RFLNBQ8N5W9 214 aa17.17■□□□□ 0.34
FOXA1-203ENST00000553751 ZNF420Q8TAQ5 688 aaPredicted RBP17.17■□□□□ 0.34
FOXA1-203ENST00000553751 SGK3Q96BR1 496 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms