RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TNFAIP6P98066 277 aaPredicted RBP19.39■□□□□ 0.69
TDP1-206ENST00000553569 CDK5R2Q13319 367 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 TIGD6Q17RP2 521 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 GFOD2Q3B7J2 385 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 OR8G5Q8NG78 346 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 ASB17Q8WXJ9 295 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 RFKQ969G6 155 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 PGAM5Q96HS1 289 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 DIRC2Q96SL1 478 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 TBX5Q99593 518 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 EGLN1Q9GZT9 426 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 SP140LQ9H930 580 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 FAM118AQ9NWS6 357 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 HAO2Q9NYQ3 351 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 AASSQ9UDR5 926 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 IKZF2Q9UKS7 526 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 IGHV1-69-2A0A0G2JMI3 117 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 LOC100130705A0A1B0GUX0 176 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 GGT3PA6NGU5 568 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 ZNF670-ZNF695F2Z2N8 137 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 XRCC2O43543 280 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 ENTPD6O75354 484 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 ADH4P08319 380 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 ACHEP22303 614 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 TNFSF4P23510 183 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 GIFP27352 417 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 PSMA6P60900 246 aaKnown RBP19.38■□□□□ 0.69
TDP1-206ENST00000553569 CXCR4P61073 352 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 SNRPGP62308 76 aaKnown RBP19.38■□□□□ 0.69
TDP1-206ENST00000553569 POU4F2Q12837 409 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 SPRNQ5BIV9 151 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 CLEC9AQ6UXN8 241 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 OR10AD1Q8NGE0 317 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 SPRYD4Q8WW59 207 aaPredicted RBP19.38■□□□□ 0.69
TDP1-206ENST00000553569 OR10A2Q9H208 303 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 CHODLQ9H9P2 273 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 ZNF275Q9NSD4 429 aaPredicted RBP19.38■□□□□ 0.69
TDP1-206ENST00000553569 CLN6Q9NWW5 311 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 TREM2Q9NZC2 230 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 CACNG2Q9Y698 323 aa19.38■□□□□ 0.69
TDP1-206ENST00000553569 USF1P22415 310 aaPredicted RBP19.37■□□□□ 0.69
TDP1-206ENST00000553569 ATP6V1E1P36543 226 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 MRPS11P82912 194 aaKnown RBP19.37■□□□□ 0.69
TDP1-206ENST00000553569 RIN1Q13671 783 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 ZNF322Q6U7Q0 402 aaPredicted RBP19.37■□□□□ 0.69
TDP1-206ENST00000553569 PRSS45Q7RTY3 260 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 ZNF555Q8NEP9 628 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 OR13G1Q8NGZ3 307 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 REEP6Q96HR9 211 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 RDH12Q96NR8 316 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 OR8B4Q96RC9 309 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 MNTQ99583 582 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 MROQ9BYG7 248 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 NIPAL2Q9H841 368 aa19.37■□□□□ 0.69
TDP1-206ENST00000553569 TANC2Q9HCD6 1990 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 IGHV4-61A0A0C4DH41 118 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 CD300LBA8K4G0 201 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 DLGAP1O14490 977 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 PHYHO14832 338 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 RP2O75695 350 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 LY6G6DO95868 133 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 CD55P08174 381 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 LOXL1Q08397 574 aaPredicted RBP19.36■□□□□ 0.69
TDP1-206ENST00000553569 Q71RC1 249 aaPredicted RBP19.36■□□□□ 0.69
TDP1-206ENST00000553569 ENTHD1Q8IYW4 607 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 ZNF679Q8IYX0 411 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 ZNF540Q8NDQ6 660 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 OR10H4Q8NGA5 316 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 OR52H1Q8NGJ2 320 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 ITLN1Q8WWA0 313 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 SLC30A2Q9BRI3 323 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 REPIN1Q9BWE0 567 aaKnown RBP19.36■□□□□ 0.69
TDP1-206ENST00000553569 OPA3Q9H6K4 179 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 DCLRE1BQ9H816 532 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 C8orf4Q9NR00 106 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 ZNF319Q9P2F9 582 aa19.36■□□□□ 0.69
TDP1-206ENST00000553569 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.36■□□□□ 0.69
TDP1-206ENST00000553569 H0YL77 283 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 MAGEB4O15481 346 aaPredicted RBP19.35■□□□□ 0.69
TDP1-206ENST00000553569 PPIHO43447 177 aaKnown RBP19.35■□□□□ 0.69
TDP1-206ENST00000553569 CRYBB2P43320 205 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 GPR6P46095 362 aaPredicted RBP19.35■□□□□ 0.69
TDP1-206ENST00000553569 RIDAP52758 137 aaKnown RBP19.35■□□□□ 0.69
TDP1-206ENST00000553569 ROM1Q03395 351 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 HNRNPA0Q13151 305 aaKnown RBP19.35■□□□□ 0.69
TDP1-206ENST00000553569 TMED1Q13445 227 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 OCLNQ16625 522 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 MEDAGQ5VYS4 303 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 DEGS2Q6QHC5 323 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 SSX6Q7RTT6 188 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 PACRGLQ8N7B6 248 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 OR56B2PQ8NGI1 322 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 CYGBQ8WWM9 190 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 SGK3Q96BR1 496 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 OR2V2Q96R30 315 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 APOL4Q9BPW4 351 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 TMEM100Q9NV29 134 aa19.35■□□□□ 0.69
TDP1-206ENST00000553569 SLC16A6O15403 523 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 MLNRO43193 412 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 HLA-DPB1P04440 258 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms