RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KIAA0040Q15053 153 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 LRRC75BQ2VPJ9 315 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 MS4A18Q3C1V0 323 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 HHATQ5VTY9 493 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TYW3Q6IPR3 259 aaKnown RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 C16orf89Q6UX73 402 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 LYPD2Q6UXB3 125 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TIFABQ6ZNK6 161 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 RPS27LQ71UM5 84 aaKnown RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 BTN2A1Q7KYR7 527 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 VMO1Q7Z5L0 202 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 LCA5Q86VQ0 697 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 SBSPONQ8IVN8 264 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 POC5Q8NA72 575 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 OR5D16Q8NGK9 328 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 FGFBP3Q8TAT2 258 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TCP10LQ8TDR4 215 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 FAM162AQ96A26 154 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 HAVCR1Q96D42 359 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 CMBLQ96DG6 245 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 NEU1Q99519 415 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 CCT7Q99832 543 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 SH3GL3Q99963 347 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 PAIP2Q9BPZ3 127 aaKnown RBP4.18□□□□□ -1.74
CKAP4-203ENST00000553039 EMC6Q9BV81 110 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 CCNB1IP1Q9NPC3 277 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM38BQ9NVV0 291 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 GLTPQ9NZD2 209 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 SELENONQ9NZV5 590 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 DCDC2Q9UHG0 476 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TMED5Q9Y3A6 229 aa4.18□□□□□ -1.74
CKAP4-203ENST00000553039 TRAV38-1A0A0B4J264 116 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ELOVL7A1L3X0 281 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NPIPB13A6NJU9 1138 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NPIPB5A8MRT5 1133 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 TMEM114B3SHH9 223 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NPIPB4C9JG80 1138 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 FTCDNL1E5RQL4 147 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 LYPLA1O75608 230 aaPredicted RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR6A2O95222 327 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 FAM107AO95990 144 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 DBIP07108 87 aaKnown RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 VIMP08670 466 aaKnown RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NEFHP12036 1026 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 EFNA1P20827 205 aaPredicted RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 KITLGP21583 273 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 PRPH2P23942 346 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 SLC6A1P30531 599 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 MYCNOSP40205 109 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ACAA2P42765 397 aaKnown RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 MAGEA12P43365 314 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 GSK3AP49840 483 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF84P51523 738 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 RPS6KA3P51812 740 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 SMU1Q2TAY7 513 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 CCDC153Q494R4 210 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 GPAT3Q53EU6 434 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 UNC50Q53HI1 259 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF385BQ569K4 471 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 PABPC1L2AQ5JQF8 200 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 C9orf152Q5JTZ5 239 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF678Q5SXM1 525 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NCR3LG1Q68D85 454 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 CCDC121Q6ZUS5 278 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 SLC22A9Q8IVM8 553 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 PEX5LQ8IYB4 626 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ADGRG5Q8IZF4 528 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 C11orf42Q8N5U0 333 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 CCDC63Q8NA47 563 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 NPEPL1Q8NDH3 523 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ADPRHL1Q8NDY3 354 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR4K5Q8NGD3 323 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR4X2Q8NGF9 303 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR52L2PQ8NGH6 319 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR6X1Q8NH79 312 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF420Q8TAQ5 688 aaPredicted RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 MIPOL1Q8TD10 442 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 BCAS4Q8TDM0 211 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 LRRC8CQ8TDW0 803 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 WIPF2Q8TF74 440 aaPredicted RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 SLC38A4Q969I6 547 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ROPN1LQ96C74 230 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 TXNDC15Q96J42 360 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 POM121L2Q96KW2 1035 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 C4orf45Q96LM5 186 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 TSSK3Q96PN8 268 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 OR5M11Q96RB7 305 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 ZNF607Q96SK3 696 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 CTDSP1Q9GZU7 261 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 FAM107BQ9H098 131 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 MMADHCQ9H3L0 296 aaPredicted RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 RMND5AQ9H871 391 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 SIAEQ9HAT2 523 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 CACYBPQ9HB71 228 aaKnown RBP4.17□□□□□ -1.74
CKAP4-203ENST00000553039 MID1IP1Q9NPA3 183 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 HSPB7Q9UBY9 170 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 BAIAP2L1Q9UHR4 511 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 PITPNC1Q9UKF7 332 aa4.17□□□□□ -1.74
CKAP4-203ENST00000553039 TRAV36DV7A0A075B6V5 113 aa4.16□□□□□ -1.74
CKAP4-203ENST00000553039 TEX13CA0A0J9YWL9 993 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms