RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 LIFP15018 202 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZNF12P17014 697 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 CRABP1P29762 137 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 GSK3BP49841 420 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 CRYBA4P53673 196 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 FGF8P55075 233 aaPredicted RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZNF121P58317 390 aaPredicted RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 FLI1Q01543 452 aaPredicted RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 SKP2Q13309 424 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 KIAA0141Q14154 515 aaPredicted RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 PTGR1Q14914 329 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 TAB1Q15750 504 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ATP6AP1Q15904 470 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZNF726P1Q15940 193 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 NDUFA5Q16718 116 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ECSCRQ19T08 205 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ACER2Q5QJU3 275 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 CST9Q5W186 159 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 TMEM42Q69YG0 159 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 C12orf54Q6X4T0 127 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 RBM23Q86U06 439 aaKnown RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 THOC6Q86W42 341 aaKnown RBP5.15□□□□□ -1.59
VPS29-210ENST00000552130 LACC1Q8IV20 430 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 C10orf107Q8IVU9 208 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 METTL13Q8N6R0 699 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 HSD17B11Q8NBQ5 300 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 HAVCR2Q8TDQ0 301 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ARPC1AQ92747 370 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 BORCS5Q969J3 196 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 SARAFQ96BY9 339 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 DNAJC19Q96DA6 116 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 PAGE5Q96GU1 130 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 FAM218AQ96MZ4 157 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 OR2V2Q96R30 315 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 RASL11BQ9BPW5 248 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ACTR6Q9GZN1 396 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 KLK15Q9H2R5 256 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 GLTPQ9NZD2 209 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 SLC2A6Q9UGQ3 507 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 NUP155O75694 1391 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 IGLV5-45A0A087WSX0 123 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 ANKRD65E5RJM6 399 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 M0R1B8 84 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 ADAM10O14672 748 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 DPM1O60762 260 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 CTSLP07711 333 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 GTF2F2P13984 249 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 FCGR2CP31995 323 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 SHMT2P34897 504 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 GALR1P47211 349 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 HOXA1P49639 335 aaPredicted RBP5.14□□□□□ -1.59
VPS29-210ENST00000552130 PPOXP50336 477 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 FABP6P51161 128 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 UBE2E1P51965 193 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 CRYBA2P53672 197 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 TCL1AP56279 114 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 OR12D2P58182 307 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 PROK1P58294 105 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 PPP1CBP62140 327 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 RPL18AQ02543 176 aaKnown RBP5.14□□□□□ -1.59
VPS29-210ENST00000552130 NFATC4Q14934 902 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 HLA-DRB5Q30154 266 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 ODF3L2Q3SX64 289 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 FHL5Q5TD97 284 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 ZNF57Q68EA5 555 aaPredicted RBP5.14□□□□□ -1.59
VPS29-210ENST00000552130 CLVS1Q8IUQ0 354 aaPredicted RBP5.14□□□□□ -1.59
VPS29-210ENST00000552130 TMEM199Q8N511 208 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 SPICQ8N5J4 248 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 OR4K17Q8NGC6 315 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 FGGYQ96C11 551 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 MRAP2Q96G30 205 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 UBE2E2Q96LR5 201 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 MAGEB18Q96M61 343 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 NODALQ96S42 347 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 DOK1Q99704 481 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 MCHR1Q99705 422 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 DHRS9Q9BPW9 319 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 ZNF2Q9BSG1 426 aaPredicted RBP5.14□□□□□ -1.59
VPS29-210ENST00000552130 SLC29A3Q9BZD2 475 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 OR51J1Q9H342 316 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 PRORYQ9H606 182 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 UGT1A7Q9HAW7 530 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 AMBNQ9NP70 447 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 TAS2R13Q9NYV9 303 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 CD84Q9UIB8 345 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 RIMS3Q9UJD0 308 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 TP53TG1Q9Y2A0 90 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 SNX10Q9Y5X0 201 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 USP6P35125 1406 aa5.14□□□□□ -1.59
VPS29-210ENST00000552130 NUP153P49790 1475 aaKnown RBP5.13□□□□□ -1.59
VPS29-210ENST00000552130 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 B4DXG7 233 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 LAD1O00515 517 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 MGRN1O60291 552 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 BCAR3O75815 825 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 EIF3GO75821 320 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS29-210ENST00000552130 SLC22A5O76082 557 aa5.13□□□□□ -1.59
VPS29-210ENST00000552130 HPRT1P00492 218 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms