RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CYP2R1Q6VVX0 501 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 DCDC5Q6ZRR9 648 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 RHOUQ7L0Q8 258 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 DOK3Q7L591 496 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 AQP11Q8NBQ7 271 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC37A3Q8NCC5 494 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 SGMS2Q8NHU3 365 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF420Q8TAQ5 688 aaPredicted RBP9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 RAB40AQ8WXH6 277 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 MAP6Q96JE9 813 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 LRGUKQ96M69 825 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 KCNJ15Q99712 375 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 COPS4Q9BT78 406 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 TSSK6Q9BXA6 273 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 MS4A7Q9GZW8 240 aaPredicted RBP9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 WDR76Q9H967 626 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 RIIAD1A6NNX1 92 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CD300LBA8K4G0 201 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 H0YL77 283 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF593O00488 134 aaPredicted RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 PHYHO14832 338 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 XRCC2O43543 280 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 PTBP3O95758 552 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CYB5R3P00387 301 aaPredicted RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 HLA-DPB1P04440 258 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF3P17036 446 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CFL1P23528 166 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 PITPNBP48739 271 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 SEC61A1P61619 476 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 UBA52P62987 128 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 GRB2P62993 217 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 MAB21L1Q13394 359 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 SNCBQ16143 134 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF362Q5T0B9 420 aaPredicted RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CD276Q5ZPR3 534 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR2T5Q6IEZ7 315 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 DCXRQ7Z4W1 244 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZDHHC22Q8N966 263 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CYB561A3Q8NBI2 242 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR9Q2Q8NGE9 314 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR2T29Q8NH02 315 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CCT8L2Q96SF2 557 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 TMEM246Q9BRR3 403 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 FN3KQ9H479 309 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 TOR3AQ9H497 397 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 C14orf119Q9NWQ9 140 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 KIF17Q9P2E2 1029 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 RNF7Q9UBF6 113 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 CLN8Q9UBY8 286 aa9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 PRPF19Q9UMS4 504 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 SAMHD1Q9Y3Z3 626 aaKnown RBP9.11□□□□□ -0.95
VTI1BP3-201ENST00000550220 DYSFO75923 2080 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 IGHV2-70DA0A0C4DH43 119 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 TCRBV5S2A0A599 114 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 TVP23AA6NH52 213 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF878C9JN71 531 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 CLDN34H7C241 214 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 SPARCP09486 303 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 RAP2AP10114 183 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 CA6P23280 308 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 PRTN3P24158 256 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 PYCR1P32322 319 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 CD80P33681 288 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 GRK5P34947 590 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 PMELP40967 661 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF92Q03936 586 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 NAA40Q86UY6 237 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 FITM2Q8N6M3 262 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 SIGLECL1Q8N7X8 197 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 CCDC197Q8NCU1 140 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR52H1Q8NGJ2 320 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 C22orf15Q8WYQ4 148 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC25A28Q96A46 364 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 UPRTQ96BW1 309 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLAMF6Q96DU3 332 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 ASB9Q96DX5 294 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 TEX12Q9BXU0 123 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 PLA2G12AQ9BZM1 189 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 NMNAT2Q9BZQ4 307 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 C1orf21Q9H246 121 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 CENPMQ9NSP4 180 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 ERVK-18Q9QC07 812 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF69Q9UC07 566 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 COMMD3-BMI1R4GMX3 469 aa9.1□□□□□ -0.95
VTI1BP3-201ENST00000550220 TRAV38-1A0A0B4J264 116 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ARRDC5A6NEK1 342 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ANKRD30BLA7E2S9 258 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 LGALS8O00214 317 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 FAM20BO75063 409 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF205O95201 554 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 FAM107AO95990 144 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 HKR1P10072 659 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 SPI1P17947 270 aa9.09□□□□□ -0.95
VTI1BP3-201ENST00000550220 ATP6V1B2P21281 511 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms