RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MVKQ03426 396 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 RAB40BQ12829 278 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 KLHL22Q53GT1 634 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 RBM48Q5RL73 367 aaKnown RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 SPATA46Q5T0L3 261 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 HIST2H3PS2Q5TEC6 136 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 OTPQ5XKR4 325 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 HIST2H3AQ71DI3 136 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 SHFQ7M4L6 423 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 ERI1Q8IV48 349 aaKnown RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 BPIFB6Q8NFQ5 453 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 OR1J2Q8NGS2 313 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 OR1J1Q8NGS3 322 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 GGHQ92820 318 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 TMEM186Q96B77 213 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 CNN2Q99439 309 aaKnown RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 MNTQ99583 582 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 YTHDF1Q9BYJ9 559 aaKnown RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 YIPF3Q9GZM5 350 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 KCNN2Q9H2S1 579 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 FGF20Q9NP95 211 aaPredicted RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 CCNB1IP1Q9NPC3 277 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 CNOT2Q9NZN8 540 aaKnown RBP11.43□□□□□ -0.58
NUP188-211ENST00000550219 GPR160Q9UJ42 338 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 GRIP1Q9Y3R0 1128 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 LHFPL6Q9Y693 200 aa11.43□□□□□ -0.58
NUP188-211ENST00000550219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.582e-8■■■■■ 29.5
NUP188-211ENST00000550219 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 C12orf71A8MTZ7 269 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 ALOX5APP20292 161 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 PCBD1P61457 104 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 AQP6Q13520 282 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 TSTQ16762 297 aaKnown RBP11.42□□□□□ -0.58
NUP188-211ENST00000550219 PABPC1L2AQ5JQF8 200 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 SLC18B1Q6NT16 456 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 DPY19L4Q7Z388 723 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
NUP188-211ENST00000550219 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 OR51G2Q8NGK0 314 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 OTOSQ8NHW6 89 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 JAM3Q9BX67 310 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 DUSP21Q9H596 190 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 SLCO1C1Q9NYB5 712 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 ASH2LQ9UBL3 628 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 PCDHGB1Q9Y5G3 927 aa11.42□□□□□ -0.58
NUP188-211ENST00000550219 IGLV3-9A0A075B6K5 115 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 IRGMA1A4Y4 181 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 FAM20BO75063 409 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 IGHA1P01876 353 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 MRPL3P09001 348 aaKnown RBP11.41□□□□□ -0.58
NUP188-211ENST00000550219 OR2T7P0C7T2 308 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 ZNF250P15622 560 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 ZNF32P17041 273 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 DCKP27707 260 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 NAA10P41227 235 aaPredicted RBP11.41□□□□□ -0.58
NUP188-211ENST00000550219 RAD52P43351 418 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 UCP2P55851 309 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 TMEM33P57088 247 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 SLC35A2P78381 396 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.41□□□□□ -0.58
NUP188-211ENST00000550219 SLC35F2Q8IXU6 374 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 OR2T27Q8NH04 317 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 AKR7LQ8NHP1 331 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 ST7LQ8TDW4 575 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 IPCEF1Q8WWN9 437 aaPredicted RBP11.41□□□□□ -0.58
NUP188-211ENST00000550219 SIGLEC11Q96RL6 698 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 ZNF649Q9BS31 505 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 CDADC1Q9BWV3 514 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 DECR2Q9NUI1 292 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 TPRKBQ9Y3C4 175 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 TIMM10BQ9Y5J6 103 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 CACNG2Q9Y698 323 aa11.41□□□□□ -0.58
NUP188-211ENST00000550219 IGHV1-69-2A0A0G2JMI3 117 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 C5orf49A4QMS7 147 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 CLDN25C9JDP6 229 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 SPRY3O43610 288 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 APOL3O95236 402 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 FADS2O95864 444 aaKnown RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 MT-ND5P03915 603 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 SPARCP09486 303 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 STOMP27105 288 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 GCH1P30793 250 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 RPS27P42677 84 aaKnown RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 HCCSP53701 268 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 MRPS11P82912 194 aaKnown RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 PSG4Q00888 419 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 SCRN3Q0VDG4 424 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 PCGF3Q3KNV8 242 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 FAHD2BQ6P2I3 314 aaPredicted RBP11.4□□□□□ -0.58
NUP188-211ENST00000550219 CORO6Q6QEF8 472 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 RHOUQ7L0Q8 258 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 LINC00346Q8IVM7 164 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 ACBD7Q8N6N7 88 aa11.4□□□□□ -0.58
NUP188-211ENST00000550219 CPEB3Q8NE35 698 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms