RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 UFSP2Q9NUQ7 469 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 INTS9Q9NV88 658 aaKnown RBP8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 GID8Q9NWU2 228 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 AP3M1Q9Y2T2 418 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 IGLV1-36A0A0B4J1U3 117 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 DCTN6O00399 190 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SOCS2O14508 198 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 MRASO14807 208 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 EDF1O60869 148 aaKnown RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 FCN3O75636 299 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 CA6P23280 308 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 TGFBR2P37173 567 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 MDH1P40925 334 aaKnown RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 ARF6P62330 175 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 OR8G1Q15617 311 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 C2orf68Q2NKX9 166 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 CDONQ4KMG0 1287 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 PRAMEF6Q5VXH4 476 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SFRP4Q6FHJ7 346 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC18B1Q6NT16 456 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 DNM1P34Q6PK57 102 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 CORO6Q6QEF8 472 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 PGAP1Q75T13 922 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 BTN2A1Q7KYR7 527 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 TSEN54Q7Z6J9 526 aaKnown RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 OR6V1Q8N148 313 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SPERTQ8NA61 448 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 LY6G5BQ8NDX9 201 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC26A10Q8NG04 563 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 FAM110DQ8TAY7 271 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC7A13Q8TCU3 470 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SPRYD4Q8WW59 207 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 SLCO4A1Q96BD0 722 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 TSSK2Q96PF2 358 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 RPS6KA6Q9UK32 745 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 B9D1Q9UPM9 204 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 IER3IP1Q9Y5U9 82 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 KPTNQ9Y664 436 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 PLXNB1O43157 2135 aa8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 TET2Q6N021 2002 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-207ENST00000550051 A0A0G2JND7 137 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 ZNF816-ZNF321PA0A0X1KG74 233 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 A0A1B0GVI7 797 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 A0A1W2PRQ8 180 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 OOEPA6NGQ2 149 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CD300LBA8K4G0 201 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 F5H5K5 113 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 DVL1O14640 695 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 LCATP04180 440 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CSF1P09603 554 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 OMPP47874 163 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 RPS6KA3P51812 740 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 FXYD6P3P58550 94 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 HOXA4Q00056 320 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 KLF10Q13118 480 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 DGCR6Q14129 220 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 OR8B8Q15620 311 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 MEP1BQ16820 701 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC36A3Q495N2 470 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 IFI44LQ53G44 452 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 TEX36Q5VZQ5 186 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CFAP77Q6ZQR2 320 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CBLL1Q75N03 491 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 SCCPDHQ8NBX0 429 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 FAM46AQ96IP4 442 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 PITX2Q99697 317 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 ATF6BQ99941 703 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 MMADHCQ9H3L0 296 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 PNRC2Q9NPJ4 139 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 GMPR2Q9P2T1 348 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 FBLN5Q9UBX5 448 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CYB5R1Q9UHQ9 305 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 RPUSD1Q9UJJ7 312 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 CAB39Q9Y376 341 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 ENPP4Q9Y6X5 453 aa8.11□□□□□ -1.11
TRAFD1-207ENST00000550051 LOC100653049A0A140TA62 436 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 ARPC3O15145 178 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 OR10H3O60404 316 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 KRT34O76011 436 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 ALX3O95076 343 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 GYPAP02724 150 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 OPN1MWP04001 364 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 FBP1P09467 338 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 GGT2P36268 569 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 CENPAP49450 140 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 TPTEP56180 551 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 ZNF92Q03936 586 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 MZT1Q08AG7 82 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 TRAP1Q12931 704 aaKnown RBP8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 MAPRE2Q15555 327 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 SLC35E4Q6ICL7 350 aa8.1□□□□□ -1.11
TRAFD1-207ENST00000550051 C1orf122Q6ZSJ8 110 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms