RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 RASD2Q96D21 266 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF317Q96PQ6 595 aaPredicted RBP1.39□□□□□ -2.19
CCDC38-206ENST00000548771 CHCHD7Q9BUK0 85 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 NEUROG2Q9H2A3 272 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 LHX5Q9H2C1 402 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 ZSCAN16Q9H4T2 348 aaPredicted RBP1.39□□□□□ -2.19
CCDC38-206ENST00000548771 DHX35Q9H5Z1 703 aaKnown RBP1.39□□□□□ -2.19
CCDC38-206ENST00000548771 BEX1Q9HBH7 125 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 SLC39A1Q9NY26 324 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF391Q9UJN7 358 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 SYNJ2BP-COX16A0A087WUM0 186 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 TRBV9A0A0B4J1U6 114 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 CEACAM18A8MTB9 384 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 PDZK1P1A8MUH7 402 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 H7C0C1 242 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 MANBAO00462 879 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 HSPD1P10809 573 aaKnown RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 OR1E1P30953 314 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 ATP5OP48047 213 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 HMGN5P82970 282 aaKnown RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SEMG2Q02383 582 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 CHRNA6Q15825 494 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 KLF14Q8TD94 323 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 CPNE4Q96A23 557 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 NRBF2Q96F24 287 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 RNF145Q96MT1 663 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 PLIN2Q99541 437 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 MARVELD1Q9BSK0 173 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SHANK2-AS3Q9BTD1 123 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 TMEM243Q9BU79 118 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 C20orf24Q9BUV8 137 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 C1orf50Q9BV19 199 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SAMD10Q9BYL1 202 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SLIRPQ9GZT3 109 aaKnown RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 ANKRA2Q9H9E1 313 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 AGPAT4Q9NRZ5 378 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 MTCH1Q9NZJ7 389 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SLC17A7Q9P2U7 560 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF230Q9UIE0 474 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-206ENST00000548771 HPCAL4Q9UM19 191 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SIGLEC7Q9Y286 467 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 SLC17A4Q9Y2C5 497 aa1.38□□□□□ -2.19
CCDC38-206ENST00000548771 TRBV11-1A0A0K0K1C0 115 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 A0A1B0GUH1 482 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 TNFRSF11BO00300 401 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 NMT2O60551 498 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 HUS1O60921 280 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 SERPINB7O75635 380 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 CNMDO75829 334 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GATBO75879 557 aaKnown RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 AQP8O94778 261 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 LSM8O95777 96 aaKnown RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 MYL2P10916 166 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 BCKDHBP21953 392 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GTF2E2P29084 291 aaKnown RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 UBE2E1P51965 193 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 NDUFA8P51970 172 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 PNOCQ13519 176 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 KLHL12Q53G59 568 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 ARMC12Q5T9G4 340 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 MED27Q6P2C8 311 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GUSBP11Q6P575 273 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 RTL4Q6ZR62 310 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 MDP1Q86V88 176 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 ERO1BQ86YB8 467 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 CBLN2Q8IUK8 224 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GTPBP8Q8N3Z3 284 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 SLC35G3Q8N808 338 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 OR4M1Q8NGD0 313 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GHSRQ92847 366 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 HAUS1Q96CS2 278 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 TVP23CQ96ET8 276 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 GPR82Q96P67 336 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 ANGPTL4Q9BY76 406 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 TMEM38AQ9H6F2 299 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 TMEM165Q9HC07 324 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 MRM3Q9HC36 420 aaKnown RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 CSNK1G1Q9HCP0 422 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 PDP1Q9P0J1 537 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 HES2Q9Y543 173 aa1.37□□□□□ -2.19
CCDC38-206ENST00000548771 COL5A3P25940 1745 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-206ENST00000548771 IGHV3OR16-9A0A0B4J2B5 98 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 A6NDN8 102 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 OR6C70A6NIJ9 312 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 MFNGO00587 321 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 GABRPO00591 440 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 SLC9A3R1O14745 358 aaPredicted RBP1.36□□□□□ -2.19
CCDC38-206ENST00000548771 TAAR5O14804 337 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 FGFR1OPO95684 399 aaKnown RBP1.36□□□□□ -2.19
CCDC38-206ENST00000548771 HPRT1P00492 218 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 MT-ND4P03905 459 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 RPN2P04844 631 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 MPV17P39210 176 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 SYKP43405 635 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 IDH2P48735 452 aaKnown RBP1.36□□□□□ -2.19
CCDC38-206ENST00000548771 MRPL19P49406 292 aaKnown RBP1.36□□□□□ -2.19
CCDC38-206ENST00000548771 RGS8P57771 180 aaPredicted RBP1.36□□□□□ -2.19
CCDC38-206ENST00000548771 LIPEQ05469 1076 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 SLC25A35Q3KQZ1 300 aa1.36□□□□□ -2.19
CCDC38-206ENST00000548771 PRSS54Q6PEW0 395 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms